RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
GEN1-208ENST00000614478 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
GEN1-208ENST00000614478 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
GEN1-208ENST00000614478 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
GEN1-208ENST00000614478 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
GEN1-208ENST00000614478 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
GEN1-208ENST00000614478 MT1EP04732 61 aa6.4□□□□□ -1.39
GEN1-208ENST00000614478 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
GEN1-208ENST00000614478 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
GEN1-208ENST00000614478 MT1LQ93083 61 aa6.28□□□□□ -1.4
GEN1-208ENST00000614478 SPRR2EP22531 72 aa6.27□□□□□ -1.41
GEN1-208ENST00000614478 SPRR2BP35325 72 aa6.27□□□□□ -1.41
GEN1-208ENST00000614478 SPRR2AP35326 72 aa6.27□□□□□ -1.41
GEN1-208ENST00000614478 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
GEN1-208ENST00000614478 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
GEN1-208ENST00000614478 NEBP20929 6669 aa6.23□□□□□ -1.41
GEN1-208ENST00000614478 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
GEN1-208ENST00000614478 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
GEN1-208ENST00000614478 MT1GP13640 62 aa6.08□□□□□ -1.44
GEN1-208ENST00000614478 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
GEN1-208ENST00000614478 SPRR2DP22532 72 aa6.06□□□□□ -1.44
GEN1-208ENST00000614478 MT1MQ8N339 61 aa6.02□□□□□ -1.44
GEN1-208ENST00000614478 INE1O15225 51 aa6.02□□□□□ -1.45
GEN1-208ENST00000614478 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
GEN1-208ENST00000614478 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
GEN1-208ENST00000614478 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP9-9Q9BYP9 154 aa5.94□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
GEN1-208ENST00000614478 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
GEN1-208ENST00000614478 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
GEN1-208ENST00000614478 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
GEN1-208ENST00000614478 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
GEN1-208ENST00000614478 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
GEN1-208ENST00000614478 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
GEN1-208ENST00000614478 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
GEN1-208ENST00000614478 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
GEN1-208ENST00000614478 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
GEN1-208ENST00000614478 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
GEN1-208ENST00000614478 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
GEN1-208ENST00000614478 MT1AP04731 61 aa5.32□□□□□ -1.56
GEN1-208ENST00000614478 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
GEN1-208ENST00000614478 MT4P47944 62 aa5.26□□□□□ -1.57
GEN1-208ENST00000614478 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
GEN1-208ENST00000614478 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
GEN1-208ENST00000614478 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
GEN1-208ENST00000614478 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
GEN1-208ENST00000614478 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
GEN1-208ENST00000614478 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
GEN1-208ENST00000614478 MT3P25713 68 aa4.83□□□□□ -1.64
GEN1-208ENST00000614478 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
GEN1-208ENST00000614478 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
GEN1-208ENST00000614478 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
GEN1-208ENST00000614478 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
GEN1-208ENST00000614478 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
GEN1-208ENST00000614478 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
GEN1-208ENST00000614478 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
GEN1-208ENST00000614478 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
GEN1-208ENST00000614478 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
GEN1-208ENST00000614478 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
GEN1-208ENST00000614478 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
GEN1-208ENST00000614478 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
GEN1-208ENST00000614478 PRM1P04553 51 aa4.13□□□□□ -1.75
GEN1-208ENST00000614478 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
GEN1-208ENST00000614478 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
GEN1-208ENST00000614478 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
GEN1-208ENST00000614478 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
GEN1-208ENST00000614478 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
GEN1-208ENST00000614478 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
GEN1-208ENST00000614478 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
GEN1-208ENST00000614478 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
GEN1-208ENST00000614478 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
GEN1-208ENST00000614478 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
GEN1-208ENST00000614478 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
GEN1-208ENST00000614478 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
GEN1-208ENST00000614478 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms