RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
USP6NL-206ENST00000609853 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
USP6NL-206ENST00000609853 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
USP6NL-206ENST00000609853 USH2AO75445 5202 aa4.66□□□□□ -1.66
USP6NL-206ENST00000609853 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
USP6NL-206ENST00000609853 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
USP6NL-206ENST00000609853 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
USP6NL-206ENST00000609853 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
USP6NL-206ENST00000609853 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
USP6NL-206ENST00000609853 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
USP6NL-206ENST00000609853 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
USP6NL-206ENST00000609853 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
USP6NL-206ENST00000609853 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
USP6NL-206ENST00000609853 KMT2DO14686 5537 aa4.3□□□□□ -1.72
USP6NL-206ENST00000609853 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
USP6NL-206ENST00000609853 MT1EP04732 61 aa4.25□□□□□ -1.73
USP6NL-206ENST00000609853 MT1LQ93083 61 aa4.21□□□□□ -1.74
USP6NL-206ENST00000609853 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
USP6NL-206ENST00000609853 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
USP6NL-206ENST00000609853 NEBP20929 6669 aa4.14□□□□□ -1.75
USP6NL-206ENST00000609853 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
USP6NL-206ENST00000609853 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
USP6NL-206ENST00000609853 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
USP6NL-206ENST00000609853 MT1GP13640 62 aa4.05□□□□□ -1.76
USP6NL-206ENST00000609853 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
USP6NL-206ENST00000609853 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
USP6NL-206ENST00000609853 MT1MQ8N339 61 aa3.98□□□□□ -1.77
USP6NL-206ENST00000609853 INE1O15225 51 aa3.97□□□□□ -1.77
USP6NL-206ENST00000609853 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
USP6NL-206ENST00000609853 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
USP6NL-206ENST00000609853 SPRR2EP22531 72 aa3.79□□□□□ -1.8
USP6NL-206ENST00000609853 SPRR2BP35325 72 aa3.79□□□□□ -1.8
USP6NL-206ENST00000609853 SPRR2AP35326 72 aa3.79□□□□□ -1.8
USP6NL-206ENST00000609853 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
USP6NL-206ENST00000609853 MT3P25713 68 aa3.67□□□□□ -1.82
USP6NL-206ENST00000609853 SPRR2DP22532 72 aa3.67□□□□□ -1.82
USP6NL-206ENST00000609853 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
USP6NL-206ENST00000609853 MT1AP04731 61 aa3.58□□□□□ -1.84
USP6NL-206ENST00000609853 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
USP6NL-206ENST00000609853 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
USP6NL-206ENST00000609853 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
USP6NL-206ENST00000609853 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
USP6NL-206ENST00000609853 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.85
USP6NL-206ENST00000609853 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
USP6NL-206ENST00000609853 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
USP6NL-206ENST00000609853 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
USP6NL-206ENST00000609853 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
USP6NL-206ENST00000609853 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
USP6NL-206ENST00000609853 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
USP6NL-206ENST00000609853 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
USP6NL-206ENST00000609853 MT4P47944 62 aa3.25□□□□□ -1.89
USP6NL-206ENST00000609853 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
USP6NL-206ENST00000609853 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
USP6NL-206ENST00000609853 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
USP6NL-206ENST00000609853 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
USP6NL-206ENST00000609853 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
USP6NL-206ENST00000609853 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
USP6NL-206ENST00000609853 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
USP6NL-206ENST00000609853 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
USP6NL-206ENST00000609853 PRM1P04553 51 aa2.94□□□□□ -1.94
USP6NL-206ENST00000609853 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
USP6NL-206ENST00000609853 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
USP6NL-206ENST00000609853 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
USP6NL-206ENST00000609853 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
USP6NL-206ENST00000609853 LCE1CQ5T751 118 aa2.58□□□□□ -2
USP6NL-206ENST00000609853 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
USP6NL-206ENST00000609853 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
USP6NL-206ENST00000609853 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
USP6NL-206ENST00000609853 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
USP6NL-206ENST00000609853 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
USP6NL-206ENST00000609853 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 95.2 ms