RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
USP6NL-205ENST00000609104 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
USP6NL-205ENST00000609104 HERC2O95714 4834 aa3.73□□□□□ -1.81
USP6NL-205ENST00000609104 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
USP6NL-205ENST00000609104 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
USP6NL-205ENST00000609104 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
USP6NL-205ENST00000609104 RYR2Q92736 4967 aa3.65□□□□□ -1.82
USP6NL-205ENST00000609104 MT1AP04731 61 aa3.65□□□□□ -1.83
USP6NL-205ENST00000609104 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
USP6NL-205ENST00000609104 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
USP6NL-205ENST00000609104 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
USP6NL-205ENST00000609104 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.85
USP6NL-205ENST00000609104 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
USP6NL-205ENST00000609104 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
USP6NL-205ENST00000609104 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
USP6NL-205ENST00000609104 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
USP6NL-205ENST00000609104 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
USP6NL-205ENST00000609104 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
USP6NL-205ENST00000609104 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
USP6NL-205ENST00000609104 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
USP6NL-205ENST00000609104 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
USP6NL-205ENST00000609104 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
USP6NL-205ENST00000609104 HERC1Q15751 4861 aa3.41□□□□□ -1.86
USP6NL-205ENST00000609104 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
USP6NL-205ENST00000609104 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
USP6NL-205ENST00000609104 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
USP6NL-205ENST00000609104 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
USP6NL-205ENST00000609104 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
USP6NL-205ENST00000609104 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
USP6NL-205ENST00000609104 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
USP6NL-205ENST00000609104 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
USP6NL-205ENST00000609104 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
USP6NL-205ENST00000609104 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.91
USP6NL-205ENST00000609104 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
USP6NL-205ENST00000609104 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
USP6NL-205ENST00000609104 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
USP6NL-205ENST00000609104 MUC2Q02817 5179 aa3.04□□□□□ -1.92
USP6NL-205ENST00000609104 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
USP6NL-205ENST00000609104 UBR4Q5T4S7 5183 aa3.01□□□□□ -1.93
USP6NL-205ENST00000609104 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
USP6NL-205ENST00000609104 ABCA13Q86UQ4 5058 aa2.97□□□□□ -1.93
USP6NL-205ENST00000609104 KMT2DO14686 5537 aa2.96□□□□□ -1.94
USP6NL-205ENST00000609104 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
USP6NL-205ENST00000609104 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
USP6NL-205ENST00000609104 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
USP6NL-205ENST00000609104 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
USP6NL-205ENST00000609104 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
USP6NL-205ENST00000609104 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
USP6NL-205ENST00000609104 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
USP6NL-205ENST00000609104 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
USP6NL-205ENST00000609104 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
USP6NL-205ENST00000609104 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
USP6NL-205ENST00000609104 NEBP20929 6669 aa2.53□□□□□ -2
USP6NL-205ENST00000609104 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
USP6NL-205ENST00000609104 USH2AO75445 5202 aa2.49□□□□□ -2.01
USP6NL-205ENST00000609104 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
USP6NL-205ENST00000609104 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.01
USP6NL-205ENST00000609104 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
USP6NL-205ENST00000609104 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
USP6NL-205ENST00000609104 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
USP6NL-205ENST00000609104 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
USP6NL-205ENST00000609104 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
USP6NL-205ENST00000609104 PHGR1C9JFL3 82 aa1.96□□□□□ -2.09
USP6NL-205ENST00000609104 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
USP6NL-205ENST00000609104 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
USP6NL-205ENST00000609104 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
USP6NL-205ENST00000609104 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
USP6NL-205ENST00000609104 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
USP6NL-205ENST00000609104 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
USP6NL-205ENST00000609104 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
USP6NL-205ENST00000609104 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
USP6NL-205ENST00000609104 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
USP6NL-205ENST00000609104 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
USP6NL-205ENST00000609104 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
USP6NL-205ENST00000609104 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
USP6NL-205ENST00000609104 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
USP6NL-205ENST00000609104 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 175.5 ms