RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
CTCFL-221ENST00000608903 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CTCFL-221ENST00000608903 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
CTCFL-221ENST00000608903 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CTCFL-221ENST00000608903 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
CTCFL-221ENST00000608903 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
CTCFL-221ENST00000608903 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
CTCFL-221ENST00000608903 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
CTCFL-221ENST00000608903 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
CTCFL-221ENST00000608903 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
CTCFL-221ENST00000608903 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
CTCFL-221ENST00000608903 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
CTCFL-221ENST00000608903 MT1EP04732 61 aa4.24□□□□□ -1.73
CTCFL-221ENST00000608903 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CTCFL-221ENST00000608903 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
CTCFL-221ENST00000608903 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
CTCFL-221ENST00000608903 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
CTCFL-221ENST00000608903 MT1LQ93083 61 aa4.13□□□□□ -1.75
CTCFL-221ENST00000608903 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
CTCFL-221ENST00000608903 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
CTCFL-221ENST00000608903 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.76
CTCFL-221ENST00000608903 SPRR2EP22531 72 aa4.07□□□□□ -1.76
CTCFL-221ENST00000608903 SPRR2BP35325 72 aa4.07□□□□□ -1.76
CTCFL-221ENST00000608903 SPRR2AP35326 72 aa4.07□□□□□ -1.76
CTCFL-221ENST00000608903 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CTCFL-221ENST00000608903 INE1O15225 51 aa4.04□□□□□ -1.76
CTCFL-221ENST00000608903 NEBP20929 6669 aa4.02□□□□□ -1.77
CTCFL-221ENST00000608903 MT1GP13640 62 aa4.02□□□□□ -1.77
CTCFL-221ENST00000608903 MT1MQ8N339 61 aa4□□□□□ -1.77
CTCFL-221ENST00000608903 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
CTCFL-221ENST00000608903 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
CTCFL-221ENST00000608903 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CTCFL-221ENST00000608903 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CTCFL-221ENST00000608903 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
CTCFL-221ENST00000608903 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CTCFL-221ENST00000608903 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
CTCFL-221ENST00000608903 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
CTCFL-221ENST00000608903 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.81
CTCFL-221ENST00000608903 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
CTCFL-221ENST00000608903 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
CTCFL-221ENST00000608903 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
CTCFL-221ENST00000608903 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CTCFL-221ENST00000608903 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CTCFL-221ENST00000608903 MT1AP04731 61 aa3.5□□□□□ -1.85
CTCFL-221ENST00000608903 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
CTCFL-221ENST00000608903 MT4P47944 62 aa3.43□□□□□ -1.86
CTCFL-221ENST00000608903 MT3P25713 68 aa3.34□□□□□ -1.87
CTCFL-221ENST00000608903 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
CTCFL-221ENST00000608903 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
CTCFL-221ENST00000608903 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
CTCFL-221ENST00000608903 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
CTCFL-221ENST00000608903 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
CTCFL-221ENST00000608903 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CTCFL-221ENST00000608903 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
CTCFL-221ENST00000608903 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CTCFL-221ENST00000608903 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
CTCFL-221ENST00000608903 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CTCFL-221ENST00000608903 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
CTCFL-221ENST00000608903 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
CTCFL-221ENST00000608903 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CTCFL-221ENST00000608903 PRM1P04553 51 aa2.86□□□□□ -1.95
CTCFL-221ENST00000608903 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CTCFL-221ENST00000608903 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
CTCFL-221ENST00000608903 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
CTCFL-221ENST00000608903 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
CTCFL-221ENST00000608903 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
CTCFL-221ENST00000608903 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
CTCFL-221ENST00000608903 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CTCFL-221ENST00000608903 LCE1CQ5T751 118 aa2.59□□□□□ -2
CTCFL-221ENST00000608903 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CTCFL-221ENST00000608903 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
CTCFL-221ENST00000608903 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
CTCFL-221ENST00000608903 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CTCFL-221ENST00000608903 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CTCFL-221ENST00000608903 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CTCFL-221ENST00000608903 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CTCFL-221ENST00000608903 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 93.2 ms