RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
HDDC2-204ENST00000608295 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
HDDC2-204ENST00000608295 TNP1P09430 55 aa5.27□□□□□ -1.57
HDDC2-204ENST00000608295 UQCR11O14957 56 aa5.24□□□□□ -1.57
HDDC2-204ENST00000608295 MT1LQ93083 61 aa5.17□□□□□ -1.58
HDDC2-204ENST00000608295 PSPHP1O15172 72 aa5.16□□□□□ -1.58
HDDC2-204ENST00000608295 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
HDDC2-204ENST00000608295 MT1GP13640 62 aa5.15□□□□□ -1.59
HDDC2-204ENST00000608295 MT1MQ8N339 61 aa5.14□□□□□ -1.59
HDDC2-204ENST00000608295 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
HDDC2-204ENST00000608295 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
HDDC2-204ENST00000608295 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
HDDC2-204ENST00000608295 V9GYY9 64 aa5.04□□□□□ -1.6
HDDC2-204ENST00000608295 K7ERS5 55 aa5.03□□□□□ -1.6
HDDC2-204ENST00000608295 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
HDDC2-204ENST00000608295 Q1T7F1 81 aa5.02□□□□□ -1.61
HDDC2-204ENST00000608295 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
HDDC2-204ENST00000608295 A6NED7 52 aa4.97□□□□□ -1.61
HDDC2-204ENST00000608295 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
HDDC2-204ENST00000608295 MT4P47944 62 aa4.95□□□□□ -1.62
HDDC2-204ENST00000608295 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
HDDC2-204ENST00000608295 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
HDDC2-204ENST00000608295 PCP4P48539 62 aa4.86□□□□□ -1.63
HDDC2-204ENST00000608295 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
HDDC2-204ENST00000608295 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
HDDC2-204ENST00000608295 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
HDDC2-204ENST00000608295 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
HDDC2-204ENST00000608295 ROMO1P60602 79 aa4.71□□□□□ -1.66
HDDC2-204ENST00000608295 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HDDC2-204ENST00000608295 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
HDDC2-204ENST00000608295 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
HDDC2-204ENST00000608295 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
HDDC2-204ENST00000608295 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
HDDC2-204ENST00000608295 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
HDDC2-204ENST00000608295 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
HDDC2-204ENST00000608295 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
HDDC2-204ENST00000608295 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
HDDC2-204ENST00000608295 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
HDDC2-204ENST00000608295 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
HDDC2-204ENST00000608295 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
HDDC2-204ENST00000608295 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
HDDC2-204ENST00000608295 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
HDDC2-204ENST00000608295 MT1AP04731 61 aa4.38□□□□□ -1.71
HDDC2-204ENST00000608295 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
HDDC2-204ENST00000608295 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
HDDC2-204ENST00000608295 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
HDDC2-204ENST00000608295 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
HDDC2-204ENST00000608295 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
HDDC2-204ENST00000608295 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
HDDC2-204ENST00000608295 KRTAP5-8O75690 187 aa4□□□□□ -1.77
HDDC2-204ENST00000608295 MT3P25713 68 aa3.98□□□□□ -1.77
HDDC2-204ENST00000608295 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
HDDC2-204ENST00000608295 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
HDDC2-204ENST00000608295 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
HDDC2-204ENST00000608295 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
HDDC2-204ENST00000608295 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
HDDC2-204ENST00000608295 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
HDDC2-204ENST00000608295 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
HDDC2-204ENST00000608295 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
HDDC2-204ENST00000608295 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
HDDC2-204ENST00000608295 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
HDDC2-204ENST00000608295 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
HDDC2-204ENST00000608295 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
HDDC2-204ENST00000608295 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
HDDC2-204ENST00000608295 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
HDDC2-204ENST00000608295 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
HDDC2-204ENST00000608295 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
HDDC2-204ENST00000608295 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
HDDC2-204ENST00000608295 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
HDDC2-204ENST00000608295 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
HDDC2-204ENST00000608295 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
HDDC2-204ENST00000608295 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
HDDC2-204ENST00000608295 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
HDDC2-204ENST00000608295 PRM1P04553 51 aa2.46□□□□□ -2.02
HDDC2-204ENST00000608295 INE1O15225 51 aa2.03□□□□□ -2.08
HDDC2-204ENST00000608295 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
HDDC2-204ENST00000608295 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 62.1 ms