RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
CTCFL-216ENST00000608263 MT1GP13640 62 aa3.54□□□□□ -1.84
CTCFL-216ENST00000608263 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.85
CTCFL-216ENST00000608263 SPRR2DP22532 72 aa3.51□□□□□ -1.85
CTCFL-216ENST00000608263 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CTCFL-216ENST00000608263 MT1LQ93083 61 aa3.47□□□□□ -1.85
CTCFL-216ENST00000608263 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
CTCFL-216ENST00000608263 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
CTCFL-216ENST00000608263 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
CTCFL-216ENST00000608263 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
CTCFL-216ENST00000608263 MT1EP04732 61 aa3.44□□□□□ -1.86
CTCFL-216ENST00000608263 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
CTCFL-216ENST00000608263 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
CTCFL-216ENST00000608263 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
CTCFL-216ENST00000608263 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
CTCFL-216ENST00000608263 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CTCFL-216ENST00000608263 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
CTCFL-216ENST00000608263 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
CTCFL-216ENST00000608263 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CTCFL-216ENST00000608263 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
CTCFL-216ENST00000608263 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
CTCFL-216ENST00000608263 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
CTCFL-216ENST00000608263 MT1MQ8N339 61 aa3.26□□□□□ -1.89
CTCFL-216ENST00000608263 MT4P47944 62 aa3.26□□□□□ -1.89
CTCFL-216ENST00000608263 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
CTCFL-216ENST00000608263 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
CTCFL-216ENST00000608263 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
CTCFL-216ENST00000608263 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
CTCFL-216ENST00000608263 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
CTCFL-216ENST00000608263 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CTCFL-216ENST00000608263 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CTCFL-216ENST00000608263 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
CTCFL-216ENST00000608263 PRM1P04553 51 aa3.02□□□□□ -1.93
CTCFL-216ENST00000608263 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
CTCFL-216ENST00000608263 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
CTCFL-216ENST00000608263 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
CTCFL-216ENST00000608263 MT3P25713 68 aa2.94□□□□□ -1.94
CTCFL-216ENST00000608263 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
CTCFL-216ENST00000608263 MT1AP04731 61 aa2.92□□□□□ -1.94
CTCFL-216ENST00000608263 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CTCFL-216ENST00000608263 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
CTCFL-216ENST00000608263 NEBP20929 6669 aa2.9□□□□□ -1.95
CTCFL-216ENST00000608263 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CTCFL-216ENST00000608263 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
CTCFL-216ENST00000608263 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
CTCFL-216ENST00000608263 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
CTCFL-216ENST00000608263 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
CTCFL-216ENST00000608263 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
CTCFL-216ENST00000608263 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
CTCFL-216ENST00000608263 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CTCFL-216ENST00000608263 LCE1EQ5T753 118 aa2.56□□□□□ -2
CTCFL-216ENST00000608263 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CTCFL-216ENST00000608263 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
CTCFL-216ENST00000608263 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
CTCFL-216ENST00000608263 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CTCFL-216ENST00000608263 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CTCFL-216ENST00000608263 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
CTCFL-216ENST00000608263 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
CTCFL-216ENST00000608263 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
CTCFL-216ENST00000608263 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
CTCFL-216ENST00000608263 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
CTCFL-216ENST00000608263 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
CTCFL-216ENST00000608263 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CTCFL-216ENST00000608263 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
CTCFL-216ENST00000608263 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
CTCFL-216ENST00000608263 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CTCFL-216ENST00000608263 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
CTCFL-216ENST00000608263 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CTCFL-216ENST00000608263 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
CTCFL-216ENST00000608263 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CTCFL-216ENST00000608263 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CTCFL-216ENST00000608263 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CTCFL-216ENST00000608263 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
CTCFL-216ENST00000608263 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
CTCFL-216ENST00000608263 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
CTCFL-216ENST00000608263 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
CTCFL-216ENST00000608263 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms