RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 LCE4AQ5TA78 99 aa7.77□□□□□ -1.17
TMEM248-207ENST00000607045 TNP1P09430 55 aa7.76□□□□□ -1.17
TMEM248-207ENST00000607045 TMEM258P61165 79 aa7.76□□□□□ -1.17
TMEM248-207ENST00000607045 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
TMEM248-207ENST00000607045 MT1LQ93083 61 aa7.74□□□□□ -1.17
TMEM248-207ENST00000607045 KRTAP4-3Q9BYR4 195 aa7.69□□□□□ -1.18
TMEM248-207ENST00000607045 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
TMEM248-207ENST00000607045 UQCR11O14957 56 aa7.66□□□□□ -1.18
TMEM248-207ENST00000607045 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
TMEM248-207ENST00000607045 H3BS24 57 aa7.6□□□□□ -1.19
TMEM248-207ENST00000607045 KRTAP5-4Q6L8H1 288 aa7.6□□□□□ -1.19
TMEM248-207ENST00000607045 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
TMEM248-207ENST00000607045 KRTAP5-10Q6L8G5 202 aa7.49□□□□□ -1.21
TMEM248-207ENST00000607045 K7ERS5 55 aa7.48□□□□□ -1.21
TMEM248-207ENST00000607045 MIR22HGQ0VDD5 57 aa7.45□□□□□ -1.22
TMEM248-207ENST00000607045 V9GYY9 64 aa7.45□□□□□ -1.22
TMEM248-207ENST00000607045 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
TMEM248-207ENST00000607045 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
TMEM248-207ENST00000607045 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
TMEM248-207ENST00000607045 PSPHP1O15172 72 aa7.28□□□□□ -1.24
TMEM248-207ENST00000607045 Q1T7F1 81 aa7.26□□□□□ -1.25
TMEM248-207ENST00000607045 KRTAP5-3Q6L8H2 238 aa7.25□□□□□ -1.25
TMEM248-207ENST00000607045 KRTAP5-7Q6L8G8 165 aa7.22□□□□□ -1.25
TMEM248-207ENST00000607045 KRTAP20-2Q3LI61 65 aa7.2□□□□□ -1.26
TMEM248-207ENST00000607045 KRTAP5-5Q701N2 237 aaPredicted RBP7.16□□□□□ -1.26
TMEM248-207ENST00000607045 SYNE1Q8NF91 8797 aaKnown RBP7.13□□□□□ -1.27
TMEM248-207ENST00000607045 A6NED7 52 aa7.11□□□□□ -1.27
TMEM248-207ENST00000607045 SPRR5A0A1B0GTR4 108 aa7.09□□□□□ -1.27
TMEM248-207ENST00000607045 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
TMEM248-207ENST00000607045 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
TMEM248-207ENST00000607045 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
TMEM248-207ENST00000607045 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
TMEM248-207ENST00000607045 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
TMEM248-207ENST00000607045 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
TMEM248-207ENST00000607045 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
TMEM248-207ENST00000607045 ROMO1P60602 79 aa6.82□□□□□ -1.32
TMEM248-207ENST00000607045 PCP4P48539 62 aa6.76□□□□□ -1.33
TMEM248-207ENST00000607045 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
TMEM248-207ENST00000607045 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
TMEM248-207ENST00000607045 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
TMEM248-207ENST00000607045 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
TMEM248-207ENST00000607045 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
TMEM248-207ENST00000607045 KRTAP5-2Q701N4 177 aa6.59□□□□□ -1.35
TMEM248-207ENST00000607045 MT1AP04731 61 aa6.56□□□□□ -1.36
TMEM248-207ENST00000607045 KRTAP5-8O75690 187 aa6.45□□□□□ -1.38
TMEM248-207ENST00000607045 A0A0A0MQY5 61 aa6.42□□□□□ -1.38
TMEM248-207ENST00000607045 OBSCNQ5VST9 7968 aa6.41□□□□□ -1.38
TMEM248-207ENST00000607045 MUC5BQ9HC84 5762 aaPredicted RBP6.4□□□□□ -1.38
TMEM248-207ENST00000607045 AHNAKQ09666 5890 aaKnown RBP6.4□□□□□ -1.39
TMEM248-207ENST00000607045 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
TMEM248-207ENST00000607045 KRTAP6-2Q3LI66 62 aa6.36□□□□□ -1.39
TMEM248-207ENST00000607045 MUC5ACP98088 5654 aa6.32□□□□□ -1.4
TMEM248-207ENST00000607045 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
TMEM248-207ENST00000607045 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
TMEM248-207ENST00000607045 MT3P25713 68 aa6.01□□□□□ -1.45
TMEM248-207ENST00000607045 KRTAP5-1Q6L8H4 278 aa6□□□□□ -1.45
TMEM248-207ENST00000607045 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
TMEM248-207ENST00000607045 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
TMEM248-207ENST00000607045 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
TMEM248-207ENST00000607045 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
TMEM248-207ENST00000607045 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
TMEM248-207ENST00000607045 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
TMEM248-207ENST00000607045 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
TMEM248-207ENST00000607045 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
TMEM248-207ENST00000607045 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
TMEM248-207ENST00000607045 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
TMEM248-207ENST00000607045 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
TMEM248-207ENST00000607045 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
TMEM248-207ENST00000607045 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
TMEM248-207ENST00000607045 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
TMEM248-207ENST00000607045 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
TMEM248-207ENST00000607045 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
TMEM248-207ENST00000607045 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
TMEM248-207ENST00000607045 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
TMEM248-207ENST00000607045 PRM1P04553 51 aa3.44□□□□□ -1.86
TMEM248-207ENST00000607045 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
TMEM248-207ENST00000607045 INE1O15225 51 aa3.04□□□□□ -1.92
TMEM248-207ENST00000607045 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 178.6 ms