RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	KRTAP2-4	Q9BYR9	128 aa		4.8	□□□□□ -1.64
ZSWIM8-223	ENST00000605216	KRTAP2-1	Q9BYU5	128 aa		4.8	□□□□□ -1.64
ZSWIM8-223	ENST00000605216	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.8	□□□□□ -1.64
ZSWIM8-223	ENST00000605216	KRTAP4-9	Q9BYQ8	210 aa		4.79	□□□□□ -1.64
ZSWIM8-223	ENST00000605216	KRTAP9-2	Q9BYQ4	174 aa		4.79	□□□□□ -1.64
ZSWIM8-223	ENST00000605216	KIAA1109	Q2LD37	5005 aa		4.77	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	KRTAP20-1	Q3LI63	56 aa		4.73	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	LCE1C	Q5T751	118 aa		4.73	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	LCE1E	Q5T753	118 aa		4.73	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	LCE1F	Q5T754	118 aa		4.73	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	LCE1A	Q5T7P2	110 aa		4.73	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	MUC17	Q685J3	4493 aa		4.72	□□□□□ -1.65
ZSWIM8-223	ENST00000605216	KRTAP19-2	Q3LHN2	52 aa		4.71	□□□□□ -1.66
ZSWIM8-223	ENST00000605216	BIRC6	Q9NR09	4857 aa		4.68	□□□□□ -1.66
ZSWIM8-223	ENST00000605216	KRTAP6-2	Q3LI66	62 aa		4.64	□□□□□ -1.67
ZSWIM8-223	ENST00000605216	PCLO	Q9Y6V0	5065 aa		4.63	□□□□□ -1.67
ZSWIM8-223	ENST00000605216	KRTAP19-7	Q3SYF9	63 aa		4.62	□□□□□ -1.67
ZSWIM8-223	ENST00000605216	KRTAP9-6	A0A140TA67	174 aa		4.59	□□□□□ -1.67
ZSWIM8-223	ENST00000605216	EPPK1	P58107	5090 aa	Known RBP	4.58	□□□□□ -1.68
ZSWIM8-223	ENST00000605216	FLG	P20930	4061 aa	Predicted RBP	4.58	□□□□□ -1.68
ZSWIM8-223	ENST00000605216	SYNE1	Q8NF91	8797 aa	Known RBP	4.54	□□□□□ -1.68
ZSWIM8-223	ENST00000605216	KRTAP9-4	Q9BYQ2	154 aa		4.52	□□□□□ -1.69
ZSWIM8-223	ENST00000605216	KRTAP6-1	Q3LI64	71 aa		4.49	□□□□□ -1.69
ZSWIM8-223	ENST00000605216	LCE4A	Q5TA78	99 aa		4.47	□□□□□ -1.69
ZSWIM8-223	ENST00000605216	KRTAP9-7	A8MTY7	169 aa		4.39	□□□□□ -1.71
ZSWIM8-223	ENST00000605216	KRTAP6-3	Q3LI67	103 aa		4.36	□□□□□ -1.71
ZSWIM8-223	ENST00000605216	KRTAP2-2	Q9BYT5	123 aa		4.3	□□□□□ -1.72
ZSWIM8-223	ENST00000605216	SYNE2	Q8WXH0	6885 aa	Known RBP	4.29	□□□□□ -1.72
ZSWIM8-223	ENST00000605216	ABCA13	Q86UQ4	5058 aa		4.27	□□□□□ -1.73
ZSWIM8-223	ENST00000605216	LCE2A	Q5TA79	106 aa	Predicted RBP	4.26	□□□□□ -1.73
ZSWIM8-223	ENST00000605216	OBSCN	Q5VST9	7968 aa		4.24	□□□□□ -1.73
ZSWIM8-223	ENST00000605216	KRTAP9-6	A8MVA2	160 aa		4.19	□□□□□ -1.74
ZSWIM8-223	ENST00000605216	MUC2	Q02817	5179 aa		4.15	□□□□□ -1.74
ZSWIM8-223	ENST00000605216	KRTAP9-9	Q9BYP9	154 aa		4.13	□□□□□ -1.75
ZSWIM8-223	ENST00000605216	HMCN2	Q8NDA2	5059 aa		4.08	□□□□□ -1.76
ZSWIM8-223	ENST00000605216	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.08	□□□□□ -1.76
ZSWIM8-223	ENST00000605216	RNF213	Q63HN8	5207 aa		4.06	□□□□□ -1.76
ZSWIM8-223	ENST00000605216	FSIP2	Q5CZC0	6907 aa		4.01	□□□□□ -1.77
ZSWIM8-223	ENST00000605216	KRTAP4-11	Q9BYQ6	195 aa		3.94	□□□□□ -1.78
ZSWIM8-223	ENST00000605216	FAT4	Q6V0I7	4981 aa		3.93	□□□□□ -1.78
ZSWIM8-223	ENST00000605216	UBR4	Q5T4S7	5183 aa		3.89	□□□□□ -1.79
ZSWIM8-223	ENST00000605216	KRTAP20-2	Q3LI61	65 aa		3.8	□□□□□ -1.8
ZSWIM8-223	ENST00000605216	KMT2D	O14686	5537 aa		3.8	□□□□□ -1.8
ZSWIM8-223	ENST00000605216	KRTAP4-4	Q9BYR3	166 aa		3.59	□□□□□ -1.83
ZSWIM8-223	ENST00000605216	KRTAP4-6	Q9BYQ5	205 aa		3.53	□□□□□ -1.84
ZSWIM8-223	ENST00000605216	MACF1	Q9UPN3	7388 aa	Known RBP	3.51	□□□□□ -1.85
ZSWIM8-223	ENST00000605216	KRTAP4-12	Q9BQ66	201 aa		3.51	□□□□□ -1.85
ZSWIM8-223	ENST00000605216	KRTAP4-2	Q9BYR5	136 aa		3.51	□□□□□ -1.85
ZSWIM8-223	ENST00000605216	USH2A	O75445	5202 aa		3.49	□□□□□ -1.85
ZSWIM8-223	ENST00000605216	NEB	P20929	6669 aa		3.48	□□□□□ -1.85
ZSWIM8-223	ENST00000605216	MUC19	Q7Z5P9	8384 aa		3.44	□□□□□ -1.86
ZSWIM8-223	ENST00000605216	MUC12	Q9UKN1	5478 aa		3.43	□□□□□ -1.86
ZSWIM8-223	ENST00000605216	DST	Q03001	7570 aa	Known RBP	3.42	□□□□□ -1.86
ZSWIM8-223	ENST00000605216	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.39	□□□□□ -1.87
ZSWIM8-223	ENST00000605216	KRTAP5-9	P26371	169 aa		3.36	□□□□□ -1.87
ZSWIM8-223	ENST00000605216	GPR98	Q8WXG9	6306 aa		3.26	□□□□□ -1.89
ZSWIM8-223	ENST00000605216	KRTAP5-4	Q6L8H1	288 aa		3.24	□□□□□ -1.89
ZSWIM8-223	ENST00000605216	SSPO	A2VEC9	5147 aa		3.23	□□□□□ -1.89
ZSWIM8-223	ENST00000605216	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.15	□□□□□ -1.91
ZSWIM8-223	ENST00000605216	MDN1	Q9NU22	5596 aa		3.03	□□□□□ -1.92
ZSWIM8-223	ENST00000605216	KRTAP5-3	Q6L8H2	238 aa		2.82	□□□□□ -1.96
ZSWIM8-223	ENST00000605216	PHGR1	C9JFL3	82 aa		2.69	□□□□□ -1.98
ZSWIM8-223	ENST00000605216	MUC5AC	P98088	5654 aa		2.64	□□□□□ -1.99
ZSWIM8-223	ENST00000605216	AHNAK2	Q8IVF2	5795 aa		2.59	□□□□□ -2
ZSWIM8-223	ENST00000605216	KRTAP5-8	O75690	187 aa		2.52	□□□□□ -2.01
ZSWIM8-223	ENST00000605216	KRTAP5-10	Q6L8G5	202 aa		2.52	□□□□□ -2.01
ZSWIM8-223	ENST00000605216	HMCN1	Q96RW7	5635 aa		2.47	□□□□□ -2.01
ZSWIM8-223	ENST00000605216	KRTAP5-2	Q701N4	177 aa		2.45	□□□□□ -2.02
ZSWIM8-223	ENST00000605216	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.36	□□□□□ -2.03
ZSWIM8-223	ENST00000605216	KRTAP5-1	Q6L8H4	278 aa		2.25	□□□□□ -2.05
ZSWIM8-223	ENST00000605216	KRTAP5-11	Q6L8G4	156 aa		2.22	□□□□□ -2.05
ZSWIM8-223	ENST00000605216	AHNAK	Q09666	5890 aa	Known RBP	2.13	□□□□□ -2.07
ZSWIM8-223	ENST00000605216	KRTAP21-1	Q3LI58	79 aa		2.08	□□□□□ -2.08
ZSWIM8-223	ENST00000605216	KRTAP21-2	Q3LI59	83 aa		2.04	□□□□□ -2.08
ZSWIM8-223	ENST00000605216	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.93	□□□□□ -2.1
ZSWIM8-223	ENST00000605216	KRTAP5-7	Q6L8G8	165 aa		1.75	□□□□□ -2.13
ZSWIM8-223	ENST00000605216	MUC16	Q8WXI7	14507 aa		1.46	□□□□□ -2.18

Retrieved 77 of 20,778 RNA–protein pairs in 96.2 ms