RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
CDCA3-212ENST00000604599 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
CDCA3-212ENST00000604599 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
CDCA3-212ENST00000604599 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
CDCA3-212ENST00000604599 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
CDCA3-212ENST00000604599 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
CDCA3-212ENST00000604599 MT1GP13640 62 aa3.97□□□□□ -1.77
CDCA3-212ENST00000604599 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
CDCA3-212ENST00000604599 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
CDCA3-212ENST00000604599 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
CDCA3-212ENST00000604599 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
CDCA3-212ENST00000604599 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
CDCA3-212ENST00000604599 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
CDCA3-212ENST00000604599 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
CDCA3-212ENST00000604599 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
CDCA3-212ENST00000604599 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.8
CDCA3-212ENST00000604599 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
CDCA3-212ENST00000604599 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
CDCA3-212ENST00000604599 MT1MQ8N339 61 aa3.8□□□□□ -1.8
CDCA3-212ENST00000604599 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
CDCA3-212ENST00000604599 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
CDCA3-212ENST00000604599 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CDCA3-212ENST00000604599 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
CDCA3-212ENST00000604599 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
CDCA3-212ENST00000604599 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
CDCA3-212ENST00000604599 PRM1P04553 51 aa3.64□□□□□ -1.83
CDCA3-212ENST00000604599 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
CDCA3-212ENST00000604599 MT1AP04731 61 aa3.59□□□□□ -1.83
CDCA3-212ENST00000604599 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
CDCA3-212ENST00000604599 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
CDCA3-212ENST00000604599 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CDCA3-212ENST00000604599 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CDCA3-212ENST00000604599 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
CDCA3-212ENST00000604599 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
CDCA3-212ENST00000604599 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
CDCA3-212ENST00000604599 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
CDCA3-212ENST00000604599 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
CDCA3-212ENST00000604599 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
CDCA3-212ENST00000604599 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
CDCA3-212ENST00000604599 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
CDCA3-212ENST00000604599 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
CDCA3-212ENST00000604599 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CDCA3-212ENST00000604599 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CDCA3-212ENST00000604599 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
CDCA3-212ENST00000604599 SPRR2EP22531 72 aa3.19□□□□□ -1.9
CDCA3-212ENST00000604599 SPRR2BP35325 72 aa3.19□□□□□ -1.9
CDCA3-212ENST00000604599 SPRR2AP35326 72 aa3.19□□□□□ -1.9
CDCA3-212ENST00000604599 MT3P25713 68 aa3.15□□□□□ -1.91
CDCA3-212ENST00000604599 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CDCA3-212ENST00000604599 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CDCA3-212ENST00000604599 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CDCA3-212ENST00000604599 NEBP20929 6669 aa3.01□□□□□ -1.93
CDCA3-212ENST00000604599 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
CDCA3-212ENST00000604599 MT4P47944 62 aa2.77□□□□□ -1.97
CDCA3-212ENST00000604599 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
CDCA3-212ENST00000604599 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
CDCA3-212ENST00000604599 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
CDCA3-212ENST00000604599 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
CDCA3-212ENST00000604599 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
CDCA3-212ENST00000604599 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
CDCA3-212ENST00000604599 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
CDCA3-212ENST00000604599 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
CDCA3-212ENST00000604599 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
CDCA3-212ENST00000604599 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
CDCA3-212ENST00000604599 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CDCA3-212ENST00000604599 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
CDCA3-212ENST00000604599 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CDCA3-212ENST00000604599 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
CDCA3-212ENST00000604599 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
CDCA3-212ENST00000604599 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
CDCA3-212ENST00000604599 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
CDCA3-212ENST00000604599 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
CDCA3-212ENST00000604599 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
CDCA3-212ENST00000604599 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
CDCA3-212ENST00000604599 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
CDCA3-212ENST00000604599 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CDCA3-212ENST00000604599 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
CDCA3-212ENST00000604599 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms