RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CDCA3-211ENST00000603043 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
CDCA3-211ENST00000603043 SPRR2EP22531 72 aa5.89□□□□□ -1.47
CDCA3-211ENST00000603043 SPRR2BP35325 72 aa5.89□□□□□ -1.47
CDCA3-211ENST00000603043 SPRR2AP35326 72 aa5.89□□□□□ -1.47
CDCA3-211ENST00000603043 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
CDCA3-211ENST00000603043 KRTAP19-7Q3SYF9 63 aa5.83□□□□□ -1.48
CDCA3-211ENST00000603043 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
CDCA3-211ENST00000603043 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
CDCA3-211ENST00000603043 MT1EP04732 61 aa5.76□□□□□ -1.49
CDCA3-211ENST00000603043 SPRR2DP22532 72 aa5.69□□□□□ -1.5
CDCA3-211ENST00000603043 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
CDCA3-211ENST00000603043 INE1O15225 51 aa5.69□□□□□ -1.5
CDCA3-211ENST00000603043 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
CDCA3-211ENST00000603043 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
CDCA3-211ENST00000603043 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
CDCA3-211ENST00000603043 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
CDCA3-211ENST00000603043 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
CDCA3-211ENST00000603043 MT1LQ93083 61 aa5.56□□□□□ -1.52
CDCA3-211ENST00000603043 MT1GP13640 62 aa5.55□□□□□ -1.52
CDCA3-211ENST00000603043 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
CDCA3-211ENST00000603043 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
CDCA3-211ENST00000603043 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
CDCA3-211ENST00000603043 MT1MQ8N339 61 aa5.46□□□□□ -1.54
CDCA3-211ENST00000603043 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
CDCA3-211ENST00000603043 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
CDCA3-211ENST00000603043 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
CDCA3-211ENST00000603043 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
CDCA3-211ENST00000603043 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
CDCA3-211ENST00000603043 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
CDCA3-211ENST00000603043 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CDCA3-211ENST00000603043 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
CDCA3-211ENST00000603043 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
CDCA3-211ENST00000603043 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
CDCA3-211ENST00000603043 LCE1DQ5T752 114 aa4.96□□□□□ -1.61
CDCA3-211ENST00000603043 MT4P47944 62 aa4.96□□□□□ -1.62
CDCA3-211ENST00000603043 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CDCA3-211ENST00000603043 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
CDCA3-211ENST00000603043 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
CDCA3-211ENST00000603043 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
CDCA3-211ENST00000603043 MT1AP04731 61 aa4.73□□□□□ -1.65
CDCA3-211ENST00000603043 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
CDCA3-211ENST00000603043 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
CDCA3-211ENST00000603043 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CDCA3-211ENST00000603043 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
CDCA3-211ENST00000603043 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CDCA3-211ENST00000603043 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CDCA3-211ENST00000603043 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
CDCA3-211ENST00000603043 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
CDCA3-211ENST00000603043 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
CDCA3-211ENST00000603043 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
CDCA3-211ENST00000603043 MT3P25713 68 aa4.32□□□□□ -1.72
CDCA3-211ENST00000603043 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
CDCA3-211ENST00000603043 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
CDCA3-211ENST00000603043 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CDCA3-211ENST00000603043 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CDCA3-211ENST00000603043 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
CDCA3-211ENST00000603043 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
CDCA3-211ENST00000603043 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CDCA3-211ENST00000603043 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
CDCA3-211ENST00000603043 PRM1P04553 51 aa3.8□□□□□ -1.8
CDCA3-211ENST00000603043 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
CDCA3-211ENST00000603043 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
CDCA3-211ENST00000603043 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
CDCA3-211ENST00000603043 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
CDCA3-211ENST00000603043 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CDCA3-211ENST00000603043 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
CDCA3-211ENST00000603043 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
CDCA3-211ENST00000603043 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
CDCA3-211ENST00000603043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CDCA3-211ENST00000603043 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CDCA3-211ENST00000603043 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
CDCA3-211ENST00000603043 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CDCA3-211ENST00000603043 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CDCA3-211ENST00000603043 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CDCA3-211ENST00000603043 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
CDCA3-211ENST00000603043 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CDCA3-211ENST00000603043 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms