RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MT1GP13640 62 aa4.77□□□□□ -1.65
RPS28-204ENST00000602140 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
RPS28-204ENST00000602140 Q1T7F1 81 aa4.76□□□□□ -1.65
RPS28-204ENST00000602140 SEC61GP60059 68 aa4.75□□□□□ -1.65
RPS28-204ENST00000602140 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
RPS28-204ENST00000602140 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
RPS28-204ENST00000602140 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
RPS28-204ENST00000602140 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
RPS28-204ENST00000602140 MT4P47944 62 aa4.7□□□□□ -1.66
RPS28-204ENST00000602140 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
RPS28-204ENST00000602140 A0A1B0GU33 70 aa4.69□□□□□ -1.66
RPS28-204ENST00000602140 MT1MQ8N339 61 aa4.69□□□□□ -1.66
RPS28-204ENST00000602140 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
RPS28-204ENST00000602140 MT1LQ93083 61 aa4.67□□□□□ -1.66
RPS28-204ENST00000602140 A0A1B0GU69 56 aa4.66□□□□□ -1.66
RPS28-204ENST00000602140 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
RPS28-204ENST00000602140 PSPHP1O15172 72 aa4.65□□□□□ -1.67
RPS28-204ENST00000602140 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
RPS28-204ENST00000602140 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
RPS28-204ENST00000602140 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
RPS28-204ENST00000602140 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
RPS28-204ENST00000602140 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
RPS28-204ENST00000602140 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
RPS28-204ENST00000602140 A6NED7 52 aa4.54□□□□□ -1.68
RPS28-204ENST00000602140 A8MU10 97 aa4.54□□□□□ -1.68
RPS28-204ENST00000602140 TNP1P09430 55 aa4.53□□□□□ -1.68
RPS28-204ENST00000602140 UQCR11O14957 56 aa4.52□□□□□ -1.69
RPS28-204ENST00000602140 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
RPS28-204ENST00000602140 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
RPS28-204ENST00000602140 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
RPS28-204ENST00000602140 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
RPS28-204ENST00000602140 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
RPS28-204ENST00000602140 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
RPS28-204ENST00000602140 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
RPS28-204ENST00000602140 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
RPS28-204ENST00000602140 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
RPS28-204ENST00000602140 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
RPS28-204ENST00000602140 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
RPS28-204ENST00000602140 K7ERS5 55 aa4.31□□□□□ -1.72
RPS28-204ENST00000602140 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
RPS28-204ENST00000602140 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
RPS28-204ENST00000602140 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
RPS28-204ENST00000602140 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
RPS28-204ENST00000602140 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
RPS28-204ENST00000602140 ROMO1P60602 79 aa4.09□□□□□ -1.75
RPS28-204ENST00000602140 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
RPS28-204ENST00000602140 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
RPS28-204ENST00000602140 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
RPS28-204ENST00000602140 MT1AP04731 61 aa3.96□□□□□ -1.78
RPS28-204ENST00000602140 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
RPS28-204ENST00000602140 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
RPS28-204ENST00000602140 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
RPS28-204ENST00000602140 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
RPS28-204ENST00000602140 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
RPS28-204ENST00000602140 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
RPS28-204ENST00000602140 MT3P25713 68 aa3.78□□□□□ -1.8
RPS28-204ENST00000602140 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
RPS28-204ENST00000602140 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
RPS28-204ENST00000602140 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
RPS28-204ENST00000602140 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
RPS28-204ENST00000602140 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
RPS28-204ENST00000602140 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
RPS28-204ENST00000602140 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
RPS28-204ENST00000602140 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
RPS28-204ENST00000602140 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
RPS28-204ENST00000602140 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
RPS28-204ENST00000602140 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
RPS28-204ENST00000602140 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
RPS28-204ENST00000602140 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
RPS28-204ENST00000602140 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
RPS28-204ENST00000602140 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
RPS28-204ENST00000602140 INE1O15225 51 aa2.63□□□□□ -1.99
RPS28-204ENST00000602140 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
RPS28-204ENST00000602140 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
RPS28-204ENST00000602140 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
RPS28-204ENST00000602140 PRM1P04553 51 aa2.12□□□□□ -2.07
RPS28-204ENST00000602140 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
RPS28-204ENST00000602140 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 1841.1 ms