RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
SNRPA-210ENST00000601393 TNP1P09430 55 aa6.13□□□□□ -1.43
SNRPA-210ENST00000601393 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
SNRPA-210ENST00000601393 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
SNRPA-210ENST00000601393 MT1GP13640 62 aa6.03□□□□□ -1.44
SNRPA-210ENST00000601393 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
SNRPA-210ENST00000601393 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
SNRPA-210ENST00000601393 MT1LQ93083 61 aa6□□□□□ -1.45
SNRPA-210ENST00000601393 ROMO1P60602 79 aa5.96□□□□□ -1.46
SNRPA-210ENST00000601393 MT1MQ8N339 61 aa5.94□□□□□ -1.46
SNRPA-210ENST00000601393 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
SNRPA-210ENST00000601393 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
SNRPA-210ENST00000601393 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
SNRPA-210ENST00000601393 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
SNRPA-210ENST00000601393 GPR98Q8WXG9 6306 aa5.74□□□□□ -1.49
SNRPA-210ENST00000601393 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
SNRPA-210ENST00000601393 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
SNRPA-210ENST00000601393 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
SNRPA-210ENST00000601393 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
SNRPA-210ENST00000601393 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
SNRPA-210ENST00000601393 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
SNRPA-210ENST00000601393 H3BS24 57 aa5.61□□□□□ -1.51
SNRPA-210ENST00000601393 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
SNRPA-210ENST00000601393 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
SNRPA-210ENST00000601393 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
SNRPA-210ENST00000601393 MT4P47944 62 aa5.52□□□□□ -1.53
SNRPA-210ENST00000601393 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
SNRPA-210ENST00000601393 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
SNRPA-210ENST00000601393 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
SNRPA-210ENST00000601393 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
SNRPA-210ENST00000601393 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
SNRPA-210ENST00000601393 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
SNRPA-210ENST00000601393 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
SNRPA-210ENST00000601393 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
SNRPA-210ENST00000601393 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
SNRPA-210ENST00000601393 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
SNRPA-210ENST00000601393 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
SNRPA-210ENST00000601393 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
SNRPA-210ENST00000601393 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
SNRPA-210ENST00000601393 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
SNRPA-210ENST00000601393 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SNRPA-210ENST00000601393 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
SNRPA-210ENST00000601393 MT1AP04731 61 aa5.11□□□□□ -1.59
SNRPA-210ENST00000601393 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
SNRPA-210ENST00000601393 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
SNRPA-210ENST00000601393 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
SNRPA-210ENST00000601393 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SNRPA-210ENST00000601393 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
SNRPA-210ENST00000601393 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
SNRPA-210ENST00000601393 MT3P25713 68 aa4.63□□□□□ -1.67
SNRPA-210ENST00000601393 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SNRPA-210ENST00000601393 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
SNRPA-210ENST00000601393 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
SNRPA-210ENST00000601393 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
SNRPA-210ENST00000601393 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
SNRPA-210ENST00000601393 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
SNRPA-210ENST00000601393 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
SNRPA-210ENST00000601393 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
SNRPA-210ENST00000601393 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
SNRPA-210ENST00000601393 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SNRPA-210ENST00000601393 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
SNRPA-210ENST00000601393 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SNRPA-210ENST00000601393 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
SNRPA-210ENST00000601393 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SNRPA-210ENST00000601393 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SNRPA-210ENST00000601393 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SNRPA-210ENST00000601393 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SNRPA-210ENST00000601393 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
SNRPA-210ENST00000601393 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
SNRPA-210ENST00000601393 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SNRPA-210ENST00000601393 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
SNRPA-210ENST00000601393 INE1O15225 51 aa3.35□□□□□ -1.87
SNRPA-210ENST00000601393 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
SNRPA-210ENST00000601393 PRM1P04553 51 aa3.05□□□□□ -1.92
SNRPA-210ENST00000601393 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SNRPA-210ENST00000601393 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
SNRPA-210ENST00000601393 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SNRPA-210ENST00000601393 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 220.7 ms