RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
SNRPA-208ENST00000600456 MT1EP04732 61 aa5.12□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SNRPA-208ENST00000600456 SPRR2DP22532 72 aa5.12□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
SNRPA-208ENST00000600456 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
SNRPA-208ENST00000600456 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
SNRPA-208ENST00000600456 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
SNRPA-208ENST00000600456 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
SNRPA-208ENST00000600456 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SNRPA-208ENST00000600456 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
SNRPA-208ENST00000600456 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
SNRPA-208ENST00000600456 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNRPA-208ENST00000600456 MT1GP13640 62 aa4.95□□□□□ -1.62
SNRPA-208ENST00000600456 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
SNRPA-208ENST00000600456 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
SNRPA-208ENST00000600456 MT1LQ93083 61 aa4.93□□□□□ -1.62
SNRPA-208ENST00000600456 ROMO1P60602 79 aa4.9□□□□□ -1.63
SNRPA-208ENST00000600456 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
SNRPA-208ENST00000600456 MT1MQ8N339 61 aa4.86□□□□□ -1.63
SNRPA-208ENST00000600456 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
SNRPA-208ENST00000600456 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
SNRPA-208ENST00000600456 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
SNRPA-208ENST00000600456 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
SNRPA-208ENST00000600456 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
SNRPA-208ENST00000600456 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SNRPA-208ENST00000600456 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
SNRPA-208ENST00000600456 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SNRPA-208ENST00000600456 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
SNRPA-208ENST00000600456 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SNRPA-208ENST00000600456 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
SNRPA-208ENST00000600456 MT4P47944 62 aa4.43□□□□□ -1.7
SNRPA-208ENST00000600456 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SNRPA-208ENST00000600456 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
SNRPA-208ENST00000600456 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
SNRPA-208ENST00000600456 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SNRPA-208ENST00000600456 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
SNRPA-208ENST00000600456 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SNRPA-208ENST00000600456 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
SNRPA-208ENST00000600456 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
SNRPA-208ENST00000600456 MT1AP04731 61 aa4.21□□□□□ -1.74
SNRPA-208ENST00000600456 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
SNRPA-208ENST00000600456 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
SNRPA-208ENST00000600456 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SNRPA-208ENST00000600456 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SNRPA-208ENST00000600456 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
SNRPA-208ENST00000600456 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
SNRPA-208ENST00000600456 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
SNRPA-208ENST00000600456 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SNRPA-208ENST00000600456 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SNRPA-208ENST00000600456 MT3P25713 68 aa3.9□□□□□ -1.79
SNRPA-208ENST00000600456 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
SNRPA-208ENST00000600456 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
SNRPA-208ENST00000600456 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SNRPA-208ENST00000600456 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SNRPA-208ENST00000600456 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SNRPA-208ENST00000600456 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
SNRPA-208ENST00000600456 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SNRPA-208ENST00000600456 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SNRPA-208ENST00000600456 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SNRPA-208ENST00000600456 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
SNRPA-208ENST00000600456 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
SNRPA-208ENST00000600456 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SNRPA-208ENST00000600456 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SNRPA-208ENST00000600456 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SNRPA-208ENST00000600456 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
SNRPA-208ENST00000600456 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
SNRPA-208ENST00000600456 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
SNRPA-208ENST00000600456 INE1O15225 51 aa2.52□□□□□ -2.01
SNRPA-208ENST00000600456 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SNRPA-208ENST00000600456 PRM1P04553 51 aa2.49□□□□□ -2.01
SNRPA-208ENST00000600456 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SNRPA-208ENST00000600456 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SNRPA-208ENST00000600456 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SNRPA-208ENST00000600456 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 251.4 ms