RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	KRTAP5-3	Q6L8H2	238 aa		5.17	□□□□□ -1.58
PRKD2-210	ENST00000597641		A0A1B0GU33	70 aa		5.14	□□□□□ -1.59
PRKD2-210	ENST00000597641	SERP1	Q9Y6X1	66 aa		5.13	□□□□□ -1.59
PRKD2-210	ENST00000597641		H7BZZ5	65 aa		5.11	□□□□□ -1.59
PRKD2-210	ENST00000597641	SEC61G	P60059	68 aa		5.09	□□□□□ -1.59
PRKD2-210	ENST00000597641	KRTAP20-2	Q3LI61	65 aa		5.08	□□□□□ -1.6
PRKD2-210	ENST00000597641		A8MU10	97 aa		5.07	□□□□□ -1.6
PRKD2-210	ENST00000597641	ATP5E	P56381	51 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKD2-210	ENST00000597641	TMEM258	P61165	79 aa		5.05	□□□□□ -1.6
PRKD2-210	ENST00000597641	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.03	□□□□□ -1.6
PRKD2-210	ENST00000597641	TNP1	P09430	55 aa		5.01	□□□□□ -1.61
PRKD2-210	ENST00000597641	SYNE1	Q8NF91	8797 aa	Known RBP	5	□□□□□ -1.61
PRKD2-210	ENST00000597641	SPRR5	A0A1B0GTR4	108 aa		4.95	□□□□□ -1.62
PRKD2-210	ENST00000597641	KRTAP12-3	P60328	96 aa		4.95	□□□□□ -1.62
PRKD2-210	ENST00000597641	SMIM26	A0A096LP01	95 aa		4.94	□□□□□ -1.62
PRKD2-210	ENST00000597641	LOC100996750	A0A140TA64	210 aa		4.92	□□□□□ -1.62
PRKD2-210	ENST00000597641		A0A1B0GU69	56 aa		4.88	□□□□□ -1.63
PRKD2-210	ENST00000597641	KRTAP12-4	P60329	112 aa		4.86	□□□□□ -1.63
PRKD2-210	ENST00000597641	RPS28	P62857	69 aa	Known RBP	4.84	□□□□□ -1.63
PRKD2-210	ENST00000597641		V9GYY9	64 aa		4.73	□□□□□ -1.65
PRKD2-210	ENST00000597641	LINC01558	Q9Y6Z2	57 aa		4.71	□□□□□ -1.66
PRKD2-210	ENST00000597641	KRTAP4-11	Q9BYQ6	195 aa		4.7	□□□□□ -1.66
PRKD2-210	ENST00000597641		Q1T7F1	81 aa		4.69	□□□□□ -1.66
PRKD2-210	ENST00000597641	PRR15L	Q9BU68	103 aa		4.69	□□□□□ -1.66
PRKD2-210	ENST00000597641	KRTAP5-2	Q701N4	177 aa		4.65	□□□□□ -1.67
PRKD2-210	ENST00000597641	KRTAP6-1	Q3LI64	71 aa		4.6	□□□□□ -1.67
PRKD2-210	ENST00000597641	KRTAP5-8	O75690	187 aa		4.58	□□□□□ -1.68
PRKD2-210	ENST00000597641	AHNAK	Q09666	5890 aa	Known RBP	4.57	□□□□□ -1.68
PRKD2-210	ENST00000597641	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKD2-210	ENST00000597641	PSPHP1	O15172	72 aa		4.57	□□□□□ -1.68
PRKD2-210	ENST00000597641	KRTAP25-1	Q3LHN0	102 aa		4.55	□□□□□ -1.68
PRKD2-210	ENST00000597641	MT1A	P04731	61 aa		4.54	□□□□□ -1.68
PRKD2-210	ENST00000597641	LCE3C	Q5T5A8	94 aa		4.54	□□□□□ -1.68
PRKD2-210	ENST00000597641	UQCR11	O14957	56 aa		4.53	□□□□□ -1.68
PRKD2-210	ENST00000597641	MUC5AC	P98088	5654 aa		4.53	□□□□□ -1.68
PRKD2-210	ENST00000597641	KRTAP19-4	Q3LI73	84 aa		4.51	□□□□□ -1.69
PRKD2-210	ENST00000597641	KRTAP15-1	Q3LI76	137 aa		4.51	□□□□□ -1.69
PRKD2-210	ENST00000597641	OBSCN	Q5VST9	7968 aa		4.48	□□□□□ -1.69
PRKD2-210	ENST00000597641		A6NED7	52 aa		4.46	□□□□□ -1.7
PRKD2-210	ENST00000597641	MIR22HG	Q0VDD5	57 aa		4.44	□□□□□ -1.7
PRKD2-210	ENST00000597641	KRTAP6-2	Q3LI66	62 aa		4.43	□□□□□ -1.7
PRKD2-210	ENST00000597641	KRTAP9-4	Q9BYQ2	154 aa		4.43	□□□□□ -1.7
PRKD2-210	ENST00000597641	KRTAP9-6	A8MVA2	160 aa		4.41	□□□□□ -1.7
PRKD2-210	ENST00000597641	CDC42SE1	Q9NRR8	79 aa		4.37	□□□□□ -1.71
PRKD2-210	ENST00000597641	KRTAP23-1	A1A580	65 aa		4.35	□□□□□ -1.71
PRKD2-210	ENST00000597641		K7ERS5	55 aa		4.33	□□□□□ -1.72
PRKD2-210	ENST00000597641	KRTAP9-9	Q9BYP9	154 aa		4.31	□□□□□ -1.72
PRKD2-210	ENST00000597641	BRK1	Q8WUW1	75 aa		4.3	□□□□□ -1.72
PRKD2-210	ENST00000597641	KRTAP5-1	Q6L8H4	278 aa		4.24	□□□□□ -1.73
PRKD2-210	ENST00000597641	PRO0628	Q9UI54	55 aa		4.16	□□□□□ -1.74
PRKD2-210	ENST00000597641	MT3	P25713	68 aa		4.12	□□□□□ -1.75
PRKD2-210	ENST00000597641	PMAIP1	Q13794	54 aa		4.08	□□□□□ -1.76
PRKD2-210	ENST00000597641	ROMO1	P60602	79 aa		4.07	□□□□□ -1.76
PRKD2-210	ENST00000597641	LCE1E	Q5T753	118 aa		3.86	□□□□□ -1.79
PRKD2-210	ENST00000597641	KTN1-AS1	Q86SY8	53 aa		3.86	□□□□□ -1.79
PRKD2-210	ENST00000597641	PRAC1	Q96KF2	57 aa		3.77	□□□□□ -1.81
PRKD2-210	ENST00000597641	KRTAP4-2	Q9BYR5	136 aa		3.77	□□□□□ -1.81
PRKD2-210	ENST00000597641	LCE1B	Q5T7P3	118 aa		3.71	□□□□□ -1.82
PRKD2-210	ENST00000597641	SVIP	Q8NHG7	77 aa		3.63	□□□□□ -1.83
PRKD2-210	ENST00000597641	LCE1C	Q5T751	118 aa		3.6	□□□□□ -1.83
PRKD2-210	ENST00000597641	KRTAP4-12	Q9BQ66	201 aa		3.55	□□□□□ -1.84
PRKD2-210	ENST00000597641	KRTAP5-11	Q6L8G4	156 aa		3.32	□□□□□ -1.88
PRKD2-210	ENST00000597641	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.25	□□□□□ -1.89
PRKD2-210	ENST00000597641	LCE1F	Q5T754	118 aa		3.23	□□□□□ -1.89
PRKD2-210	ENST00000597641	LUZP6	Q538Z0	58 aa		3.2	□□□□□ -1.9
PRKD2-210	ENST00000597641	LCE3D	Q9BYE3	92 aa		3.17	□□□□□ -1.9
PRKD2-210	ENST00000597641	PHGR1	C9JFL3	82 aa		3.11	□□□□□ -1.91
PRKD2-210	ENST00000597641	KRTAP21-2	Q3LI59	83 aa		3.04	□□□□□ -1.92
PRKD2-210	ENST00000597641	NDUFAF8	A1L188	74 aa		2.94	□□□□□ -1.94
PRKD2-210	ENST00000597641	LCE3E	Q5T5B0	92 aa		2.93	□□□□□ -1.94
PRKD2-210	ENST00000597641	KRTAP4-4	Q9BYR3	166 aa		2.87	□□□□□ -1.95
PRKD2-210	ENST00000597641	MUC19	Q7Z5P9	8384 aa		2.8	□□□□□ -1.96
PRKD2-210	ENST00000597641		A0A0A0MQY5	61 aa		2.62	□□□□□ -1.99
PRKD2-210	ENST00000597641	INE1	O15225	51 aa		2.5	□□□□□ -2.01
PRKD2-210	ENST00000597641		H3BS24	57 aa		2.32	□□□□□ -2.04
PRKD2-210	ENST00000597641	KRTAP21-1	Q3LI58	79 aa		2.32	□□□□□ -2.04
PRKD2-210	ENST00000597641	PRM1	P04553	51 aa		2.09	□□□□□ -2.07
PRKD2-210	ENST00000597641	MUC16	Q8WXI7	14507 aa		1.98	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 161.3 ms