RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 SPRR2BP35325 72 aa6.89□□□□□ -1.31
ARHGEF1-205ENST00000593609 SPRR2AP35326 72 aa6.89□□□□□ -1.31
ARHGEF1-205ENST00000593609 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
ARHGEF1-205ENST00000593609 MT1LQ93083 61 aa6.75□□□□□ -1.33
ARHGEF1-205ENST00000593609 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
ARHGEF1-205ENST00000593609 MT1GP13640 62 aa6.71□□□□□ -1.34
ARHGEF1-205ENST00000593609 SPRR2DP22532 72 aa6.66□□□□□ -1.34
ARHGEF1-205ENST00000593609 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
ARHGEF1-205ENST00000593609 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
ARHGEF1-205ENST00000593609 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
ARHGEF1-205ENST00000593609 MT1MQ8N339 61 aa6.58□□□□□ -1.36
ARHGEF1-205ENST00000593609 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
ARHGEF1-205ENST00000593609 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
ARHGEF1-205ENST00000593609 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
ARHGEF1-205ENST00000593609 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
ARHGEF1-205ENST00000593609 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
ARHGEF1-205ENST00000593609 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
ARHGEF1-205ENST00000593609 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
ARHGEF1-205ENST00000593609 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
ARHGEF1-205ENST00000593609 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
ARHGEF1-205ENST00000593609 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
ARHGEF1-205ENST00000593609 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
ARHGEF1-205ENST00000593609 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
ARHGEF1-205ENST00000593609 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
ARHGEF1-205ENST00000593609 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
ARHGEF1-205ENST00000593609 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
ARHGEF1-205ENST00000593609 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
ARHGEF1-205ENST00000593609 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
ARHGEF1-205ENST00000593609 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
ARHGEF1-205ENST00000593609 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
ARHGEF1-205ENST00000593609 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
ARHGEF1-205ENST00000593609 MT1AP04731 61 aa5.77□□□□□ -1.49
ARHGEF1-205ENST00000593609 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
ARHGEF1-205ENST00000593609 MT4P47944 62 aa5.74□□□□□ -1.49
ARHGEF1-205ENST00000593609 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
ARHGEF1-205ENST00000593609 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
ARHGEF1-205ENST00000593609 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
ARHGEF1-205ENST00000593609 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
ARHGEF1-205ENST00000593609 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
ARHGEF1-205ENST00000593609 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
ARHGEF1-205ENST00000593609 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
ARHGEF1-205ENST00000593609 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
ARHGEF1-205ENST00000593609 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
ARHGEF1-205ENST00000593609 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
ARHGEF1-205ENST00000593609 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
ARHGEF1-205ENST00000593609 MT3P25713 68 aa5.25□□□□□ -1.57
ARHGEF1-205ENST00000593609 GPR98Q8WXG9 6306 aa5.18□□□□□ -1.58
ARHGEF1-205ENST00000593609 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
ARHGEF1-205ENST00000593609 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
ARHGEF1-205ENST00000593609 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
ARHGEF1-205ENST00000593609 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
ARHGEF1-205ENST00000593609 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
ARHGEF1-205ENST00000593609 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
ARHGEF1-205ENST00000593609 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
ARHGEF1-205ENST00000593609 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
ARHGEF1-205ENST00000593609 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
ARHGEF1-205ENST00000593609 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
ARHGEF1-205ENST00000593609 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
ARHGEF1-205ENST00000593609 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
ARHGEF1-205ENST00000593609 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
ARHGEF1-205ENST00000593609 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
ARHGEF1-205ENST00000593609 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
ARHGEF1-205ENST00000593609 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
ARHGEF1-205ENST00000593609 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
ARHGEF1-205ENST00000593609 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
ARHGEF1-205ENST00000593609 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
ARHGEF1-205ENST00000593609 INE1O15225 51 aa4.16□□□□□ -1.74
ARHGEF1-205ENST00000593609 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
ARHGEF1-205ENST00000593609 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
ARHGEF1-205ENST00000593609 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
ARHGEF1-205ENST00000593609 PRM1P04553 51 aa3.71□□□□□ -1.82
ARHGEF1-205ENST00000593609 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
ARHGEF1-205ENST00000593609 H3BS24 57 aa3.47□□□□□ -1.85
ARHGEF1-205ENST00000593609 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
ARHGEF1-205ENST00000593609 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
ARHGEF1-205ENST00000593609 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
ARHGEF1-205ENST00000593609 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
ARHGEF1-205ENST00000593609 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms