RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MT1EP04732 61 aa5.53□□□□□ -1.52
DDX39A-221ENST00000593026 SPRR2DP22532 72 aa5.53□□□□□ -1.52
DDX39A-221ENST00000593026 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
DDX39A-221ENST00000593026 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
DDX39A-221ENST00000593026 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
DDX39A-221ENST00000593026 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
DDX39A-221ENST00000593026 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
DDX39A-221ENST00000593026 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
DDX39A-221ENST00000593026 ROMO1P60602 79 aa5.4□□□□□ -1.54
DDX39A-221ENST00000593026 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
DDX39A-221ENST00000593026 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
DDX39A-221ENST00000593026 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
DDX39A-221ENST00000593026 MT1LQ93083 61 aa5.34□□□□□ -1.55
DDX39A-221ENST00000593026 MT1GP13640 62 aa5.33□□□□□ -1.56
DDX39A-221ENST00000593026 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
DDX39A-221ENST00000593026 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
DDX39A-221ENST00000593026 MT1MQ8N339 61 aa5.24□□□□□ -1.57
DDX39A-221ENST00000593026 H3BS24 57 aa5.23□□□□□ -1.57
DDX39A-221ENST00000593026 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
DDX39A-221ENST00000593026 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
DDX39A-221ENST00000593026 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
DDX39A-221ENST00000593026 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
DDX39A-221ENST00000593026 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
DDX39A-221ENST00000593026 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
DDX39A-221ENST00000593026 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
DDX39A-221ENST00000593026 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
DDX39A-221ENST00000593026 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
DDX39A-221ENST00000593026 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
DDX39A-221ENST00000593026 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
DDX39A-221ENST00000593026 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
DDX39A-221ENST00000593026 MT4P47944 62 aa4.8□□□□□ -1.64
DDX39A-221ENST00000593026 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
DDX39A-221ENST00000593026 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
DDX39A-221ENST00000593026 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
DDX39A-221ENST00000593026 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
DDX39A-221ENST00000593026 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
DDX39A-221ENST00000593026 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
DDX39A-221ENST00000593026 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
DDX39A-221ENST00000593026 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
DDX39A-221ENST00000593026 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
DDX39A-221ENST00000593026 MT1AP04731 61 aa4.55□□□□□ -1.68
DDX39A-221ENST00000593026 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
DDX39A-221ENST00000593026 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
DDX39A-221ENST00000593026 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
DDX39A-221ENST00000593026 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
DDX39A-221ENST00000593026 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
DDX39A-221ENST00000593026 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
DDX39A-221ENST00000593026 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
DDX39A-221ENST00000593026 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
DDX39A-221ENST00000593026 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
DDX39A-221ENST00000593026 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
DDX39A-221ENST00000593026 MT3P25713 68 aa4.15□□□□□ -1.75
DDX39A-221ENST00000593026 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
DDX39A-221ENST00000593026 INE1O15225 51 aa4.06□□□□□ -1.76
DDX39A-221ENST00000593026 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
DDX39A-221ENST00000593026 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
DDX39A-221ENST00000593026 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
DDX39A-221ENST00000593026 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
DDX39A-221ENST00000593026 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
DDX39A-221ENST00000593026 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
DDX39A-221ENST00000593026 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
DDX39A-221ENST00000593026 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
DDX39A-221ENST00000593026 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
DDX39A-221ENST00000593026 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
DDX39A-221ENST00000593026 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
DDX39A-221ENST00000593026 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
DDX39A-221ENST00000593026 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
DDX39A-221ENST00000593026 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
DDX39A-221ENST00000593026 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
DDX39A-221ENST00000593026 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
DDX39A-221ENST00000593026 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
DDX39A-221ENST00000593026 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
DDX39A-221ENST00000593026 PRM1P04553 51 aa2.77□□□□□ -1.97
DDX39A-221ENST00000593026 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
DDX39A-221ENST00000593026 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
DDX39A-221ENST00000593026 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
DDX39A-221ENST00000593026 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
DDX39A-221ENST00000593026 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 73.4 ms