RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 MT1EP04732 61 aa7.35□□□□□ -1.23
TCF3-213ENST00000590436 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
TCF3-213ENST00000590436 SPRR2EP22531 72 aa7.32□□□□□ -1.24
TCF3-213ENST00000590436 SPRR2BP35325 72 aa7.32□□□□□ -1.24
TCF3-213ENST00000590436 SPRR2AP35326 72 aa7.32□□□□□ -1.24
TCF3-213ENST00000590436 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
TCF3-213ENST00000590436 MUC12Q9UKN1 5478 aa7.32□□□□□ -1.24
TCF3-213ENST00000590436 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
TCF3-213ENST00000590436 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
TCF3-213ENST00000590436 NEBP20929 6669 aa7.25□□□□□ -1.25
TCF3-213ENST00000590436 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
TCF3-213ENST00000590436 MDN1Q9NU22 5596 aa7.21□□□□□ -1.25
TCF3-213ENST00000590436 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
TCF3-213ENST00000590436 KRTAP19-3Q7Z4W3 81 aa7.16□□□□□ -1.26
TCF3-213ENST00000590436 MT1LQ93083 61 aa7.13□□□□□ -1.27
TCF3-213ENST00000590436 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
TCF3-213ENST00000590436 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
TCF3-213ENST00000590436 MT1GP13640 62 aa7.07□□□□□ -1.28
TCF3-213ENST00000590436 SPRR2DP22532 72 aa7.07□□□□□ -1.28
TCF3-213ENST00000590436 KRTAP4-2Q9BYR5 136 aa7.04□□□□□ -1.28
TCF3-213ENST00000590436 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
TCF3-213ENST00000590436 MT1MQ8N339 61 aa6.95□□□□□ -1.3
TCF3-213ENST00000590436 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
TCF3-213ENST00000590436 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
TCF3-213ENST00000590436 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
TCF3-213ENST00000590436 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
TCF3-213ENST00000590436 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
TCF3-213ENST00000590436 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
TCF3-213ENST00000590436 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
TCF3-213ENST00000590436 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
TCF3-213ENST00000590436 KRTAP2-2Q9BYT5 123 aa6.69□□□□□ -1.34
TCF3-213ENST00000590436 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
TCF3-213ENST00000590436 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
TCF3-213ENST00000590436 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
TCF3-213ENST00000590436 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
TCF3-213ENST00000590436 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
TCF3-213ENST00000590436 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
TCF3-213ENST00000590436 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
TCF3-213ENST00000590436 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
TCF3-213ENST00000590436 MT4P47944 62 aa6.12□□□□□ -1.43
TCF3-213ENST00000590436 MT1AP04731 61 aa6.08□□□□□ -1.44
TCF3-213ENST00000590436 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
TCF3-213ENST00000590436 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
TCF3-213ENST00000590436 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
TCF3-213ENST00000590436 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
TCF3-213ENST00000590436 KRTAP20-2Q3LI61 65 aa5.87□□□□□ -1.47
TCF3-213ENST00000590436 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
TCF3-213ENST00000590436 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
TCF3-213ENST00000590436 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
TCF3-213ENST00000590436 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
TCF3-213ENST00000590436 MT3P25713 68 aa5.54□□□□□ -1.52
TCF3-213ENST00000590436 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
TCF3-213ENST00000590436 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
TCF3-213ENST00000590436 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
TCF3-213ENST00000590436 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
TCF3-213ENST00000590436 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
TCF3-213ENST00000590436 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
TCF3-213ENST00000590436 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
TCF3-213ENST00000590436 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
TCF3-213ENST00000590436 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
TCF3-213ENST00000590436 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
TCF3-213ENST00000590436 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
TCF3-213ENST00000590436 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
TCF3-213ENST00000590436 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
TCF3-213ENST00000590436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
TCF3-213ENST00000590436 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
TCF3-213ENST00000590436 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
TCF3-213ENST00000590436 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
TCF3-213ENST00000590436 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
TCF3-213ENST00000590436 INE1O15225 51 aa4.37□□□□□ -1.71
TCF3-213ENST00000590436 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
TCF3-213ENST00000590436 PRM1P04553 51 aa3.94□□□□□ -1.78
TCF3-213ENST00000590436 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
TCF3-213ENST00000590436 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
TCF3-213ENST00000590436 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
TCF3-213ENST00000590436 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
TCF3-213ENST00000590436 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
TCF3-213ENST00000590436 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms