RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
NPC1-208ENST00000590301 COX7CP15954 63 aa2.96□□□□□ -1.94
NPC1-208ENST00000590301 A8MU10 97 aa2.94□□□□□ -1.94
NPC1-208ENST00000590301 COA5Q86WW8 74 aa2.94□□□□□ -1.94
NPC1-208ENST00000590301 A0A1B0GU33 70 aa2.93□□□□□ -1.94
NPC1-208ENST00000590301 H7BZZ5 65 aa2.93□□□□□ -1.94
NPC1-208ENST00000590301 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
NPC1-208ENST00000590301 RPS28P62857 69 aaKnown RBP2.9□□□□□ -1.95
NPC1-208ENST00000590301 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
NPC1-208ENST00000590301 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
NPC1-208ENST00000590301 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
NPC1-208ENST00000590301 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
NPC1-208ENST00000590301 A0A0D9SG42 100 aa2.84□□□□□ -1.95
NPC1-208ENST00000590301 MT1EP04732 61 aa2.84□□□□□ -1.95
NPC1-208ENST00000590301 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
NPC1-208ENST00000590301 TMEM258P61165 79 aa2.83□□□□□ -1.96
NPC1-208ENST00000590301 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
NPC1-208ENST00000590301 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
NPC1-208ENST00000590301 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
NPC1-208ENST00000590301 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
NPC1-208ENST00000590301 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
NPC1-208ENST00000590301 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
NPC1-208ENST00000590301 MT1GP13640 62 aa2.77□□□□□ -1.97
NPC1-208ENST00000590301 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
NPC1-208ENST00000590301 A0A1B0GU69 56 aa2.76□□□□□ -1.97
NPC1-208ENST00000590301 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
NPC1-208ENST00000590301 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
NPC1-208ENST00000590301 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
NPC1-208ENST00000590301 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
NPC1-208ENST00000590301 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
NPC1-208ENST00000590301 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
NPC1-208ENST00000590301 TNP1P09430 55 aa2.71□□□□□ -1.98
NPC1-208ENST00000590301 MT1MQ8N339 61 aa2.7□□□□□ -1.98
NPC1-208ENST00000590301 MT1LQ93083 61 aa2.7□□□□□ -1.98
NPC1-208ENST00000590301 PRR15LQ9BU68 103 aa2.7□□□□□ -1.98
NPC1-208ENST00000590301 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
NPC1-208ENST00000590301 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
NPC1-208ENST00000590301 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
NPC1-208ENST00000590301 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
NPC1-208ENST00000590301 MT4P47944 62 aa2.62□□□□□ -1.99
NPC1-208ENST00000590301 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
NPC1-208ENST00000590301 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
NPC1-208ENST00000590301 ROMO1P60602 79 aa2.6□□□□□ -1.99
NPC1-208ENST00000590301 UQCR11O14957 56 aa2.59□□□□□ -1.99
NPC1-208ENST00000590301 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
NPC1-208ENST00000590301 Q1T7F1 81 aa2.55□□□□□ -2
NPC1-208ENST00000590301 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
NPC1-208ENST00000590301 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
NPC1-208ENST00000590301 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
NPC1-208ENST00000590301 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
NPC1-208ENST00000590301 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
NPC1-208ENST00000590301 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
NPC1-208ENST00000590301 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
NPC1-208ENST00000590301 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
NPC1-208ENST00000590301 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
NPC1-208ENST00000590301 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
NPC1-208ENST00000590301 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
NPC1-208ENST00000590301 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
NPC1-208ENST00000590301 CDC42SE1Q9NRR8 79 aa2.39□□□□□ -2.03
NPC1-208ENST00000590301 MT1AP04731 61 aa2.3□□□□□ -2.04
NPC1-208ENST00000590301 INE1O15225 51 aa2.29□□□□□ -2.04
NPC1-208ENST00000590301 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
NPC1-208ENST00000590301 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
NPC1-208ENST00000590301 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
NPC1-208ENST00000590301 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
NPC1-208ENST00000590301 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
NPC1-208ENST00000590301 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
NPC1-208ENST00000590301 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
NPC1-208ENST00000590301 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
NPC1-208ENST00000590301 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
NPC1-208ENST00000590301 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
NPC1-208ENST00000590301 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
NPC1-208ENST00000590301 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
NPC1-208ENST00000590301 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
NPC1-208ENST00000590301 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
NPC1-208ENST00000590301 PRM1P04553 51 aa1.19□□□□□ -2.22
NPC1-208ENST00000590301 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
NPC1-208ENST00000590301 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms