RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
NEDD4L-228ENST00000590248 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
NEDD4L-228ENST00000590248 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
NEDD4L-228ENST00000590248 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
NEDD4L-228ENST00000590248 TMEM258P61165 79 aa4.76□□□□□ -1.65
NEDD4L-228ENST00000590248 MT4P47944 62 aa4.75□□□□□ -1.65
NEDD4L-228ENST00000590248 UQCR11O14957 56 aa4.74□□□□□ -1.65
NEDD4L-228ENST00000590248 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
NEDD4L-228ENST00000590248 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
NEDD4L-228ENST00000590248 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
NEDD4L-228ENST00000590248 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
NEDD4L-228ENST00000590248 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
NEDD4L-228ENST00000590248 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
NEDD4L-228ENST00000590248 PSPHP1O15172 72 aa4.59□□□□□ -1.67
NEDD4L-228ENST00000590248 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
NEDD4L-228ENST00000590248 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
NEDD4L-228ENST00000590248 K7ERS5 55 aa4.53□□□□□ -1.68
NEDD4L-228ENST00000590248 Q1T7F1 81 aa4.5□□□□□ -1.69
NEDD4L-228ENST00000590248 V9GYY9 64 aa4.5□□□□□ -1.69
NEDD4L-228ENST00000590248 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
NEDD4L-228ENST00000590248 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
NEDD4L-228ENST00000590248 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
NEDD4L-228ENST00000590248 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
NEDD4L-228ENST00000590248 A6NED7 52 aa4.39□□□□□ -1.71
NEDD4L-228ENST00000590248 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
NEDD4L-228ENST00000590248 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
NEDD4L-228ENST00000590248 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
NEDD4L-228ENST00000590248 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
NEDD4L-228ENST00000590248 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
NEDD4L-228ENST00000590248 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
NEDD4L-228ENST00000590248 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
NEDD4L-228ENST00000590248 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
NEDD4L-228ENST00000590248 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
NEDD4L-228ENST00000590248 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
NEDD4L-228ENST00000590248 ROMO1P60602 79 aa4.25□□□□□ -1.73
NEDD4L-228ENST00000590248 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
NEDD4L-228ENST00000590248 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
NEDD4L-228ENST00000590248 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
NEDD4L-228ENST00000590248 MT1AP04731 61 aa4.14□□□□□ -1.75
NEDD4L-228ENST00000590248 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
NEDD4L-228ENST00000590248 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
NEDD4L-228ENST00000590248 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
NEDD4L-228ENST00000590248 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
NEDD4L-228ENST00000590248 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
NEDD4L-228ENST00000590248 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
NEDD4L-228ENST00000590248 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
NEDD4L-228ENST00000590248 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
NEDD4L-228ENST00000590248 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
NEDD4L-228ENST00000590248 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
NEDD4L-228ENST00000590248 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
NEDD4L-228ENST00000590248 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
NEDD4L-228ENST00000590248 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
NEDD4L-228ENST00000590248 MT3P25713 68 aa3.78□□□□□ -1.8
NEDD4L-228ENST00000590248 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
NEDD4L-228ENST00000590248 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
NEDD4L-228ENST00000590248 H3BS24 57 aa3.74□□□□□ -1.81
NEDD4L-228ENST00000590248 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
NEDD4L-228ENST00000590248 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
NEDD4L-228ENST00000590248 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
NEDD4L-228ENST00000590248 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
NEDD4L-228ENST00000590248 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
NEDD4L-228ENST00000590248 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
NEDD4L-228ENST00000590248 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
NEDD4L-228ENST00000590248 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
NEDD4L-228ENST00000590248 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
NEDD4L-228ENST00000590248 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
NEDD4L-228ENST00000590248 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
NEDD4L-228ENST00000590248 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
NEDD4L-228ENST00000590248 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
NEDD4L-228ENST00000590248 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
NEDD4L-228ENST00000590248 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
NEDD4L-228ENST00000590248 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
NEDD4L-228ENST00000590248 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
NEDD4L-228ENST00000590248 INE1O15225 51 aa2.46□□□□□ -2.02
NEDD4L-228ENST00000590248 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
NEDD4L-228ENST00000590248 PRM1P04553 51 aa2.21□□□□□ -2.06
NEDD4L-228ENST00000590248 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
NEDD4L-228ENST00000590248 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 1122.9 ms