RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 K7ERS5 55 aa4.34□□□□□ -1.71
TOMM40-204ENST00000589253 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
TOMM40-204ENST00000589253 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
TOMM40-204ENST00000589253 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
TOMM40-204ENST00000589253 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
TOMM40-204ENST00000589253 MT1EP04732 61 aa4.3□□□□□ -1.72
TOMM40-204ENST00000589253 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
TOMM40-204ENST00000589253 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
TOMM40-204ENST00000589253 MT4P47944 62 aa4.26□□□□□ -1.73
TOMM40-204ENST00000589253 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
TOMM40-204ENST00000589253 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
TOMM40-204ENST00000589253 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
TOMM40-204ENST00000589253 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
TOMM40-204ENST00000589253 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TOMM40-204ENST00000589253 MT1LQ93083 61 aa4.16□□□□□ -1.74
TOMM40-204ENST00000589253 MT1GP13640 62 aa4.15□□□□□ -1.75
TOMM40-204ENST00000589253 ROMO1P60602 79 aa4.15□□□□□ -1.75
TOMM40-204ENST00000589253 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
TOMM40-204ENST00000589253 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
TOMM40-204ENST00000589253 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
TOMM40-204ENST00000589253 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
TOMM40-204ENST00000589253 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
TOMM40-204ENST00000589253 MT1MQ8N339 61 aa4.08□□□□□ -1.76
TOMM40-204ENST00000589253 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
TOMM40-204ENST00000589253 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
TOMM40-204ENST00000589253 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
TOMM40-204ENST00000589253 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
TOMM40-204ENST00000589253 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
TOMM40-204ENST00000589253 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
TOMM40-204ENST00000589253 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
TOMM40-204ENST00000589253 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
TOMM40-204ENST00000589253 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
TOMM40-204ENST00000589253 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
TOMM40-204ENST00000589253 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TOMM40-204ENST00000589253 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
TOMM40-204ENST00000589253 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
TOMM40-204ENST00000589253 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
TOMM40-204ENST00000589253 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
TOMM40-204ENST00000589253 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
TOMM40-204ENST00000589253 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
TOMM40-204ENST00000589253 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
TOMM40-204ENST00000589253 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
TOMM40-204ENST00000589253 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
TOMM40-204ENST00000589253 MT1AP04731 61 aa3.53□□□□□ -1.84
TOMM40-204ENST00000589253 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
TOMM40-204ENST00000589253 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
TOMM40-204ENST00000589253 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
TOMM40-204ENST00000589253 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
TOMM40-204ENST00000589253 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
TOMM40-204ENST00000589253 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
TOMM40-204ENST00000589253 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
TOMM40-204ENST00000589253 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
TOMM40-204ENST00000589253 H3BS24 57 aa3.35□□□□□ -1.87
TOMM40-204ENST00000589253 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
TOMM40-204ENST00000589253 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
TOMM40-204ENST00000589253 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
TOMM40-204ENST00000589253 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
TOMM40-204ENST00000589253 MT3P25713 68 aa3.17□□□□□ -1.9
TOMM40-204ENST00000589253 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
TOMM40-204ENST00000589253 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
TOMM40-204ENST00000589253 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
TOMM40-204ENST00000589253 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
TOMM40-204ENST00000589253 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
TOMM40-204ENST00000589253 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
TOMM40-204ENST00000589253 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
TOMM40-204ENST00000589253 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
TOMM40-204ENST00000589253 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
TOMM40-204ENST00000589253 LCE1FQ5T754 118 aa2.55□□□□□ -2
TOMM40-204ENST00000589253 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
TOMM40-204ENST00000589253 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TOMM40-204ENST00000589253 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
TOMM40-204ENST00000589253 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TOMM40-204ENST00000589253 PRM1P04553 51 aa2.17□□□□□ -2.06
TOMM40-204ENST00000589253 INE1O15225 51 aa2.15□□□□□ -2.07
TOMM40-204ENST00000589253 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
TOMM40-204ENST00000589253 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TOMM40-204ENST00000589253 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
TOMM40-204ENST00000589253 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms