RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 TMEM258P61165 79 aa3.68□□□□□ -1.82
PTPN2-208ENST00000589216 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
PTPN2-208ENST00000589216 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
PTPN2-208ENST00000589216 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
PTPN2-208ENST00000589216 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
PTPN2-208ENST00000589216 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
PTPN2-208ENST00000589216 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
PTPN2-208ENST00000589216 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
PTPN2-208ENST00000589216 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
PTPN2-208ENST00000589216 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
PTPN2-208ENST00000589216 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
PTPN2-208ENST00000589216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
PTPN2-208ENST00000589216 TNP1P09430 55 aa3.54□□□□□ -1.84
PTPN2-208ENST00000589216 UQCR11O14957 56 aa3.53□□□□□ -1.84
PTPN2-208ENST00000589216 MT1LQ93083 61 aa3.53□□□□□ -1.84
PTPN2-208ENST00000589216 MT1GP13640 62 aa3.51□□□□□ -1.85
PTPN2-208ENST00000589216 MT1MQ8N339 61 aa3.51□□□□□ -1.85
PTPN2-208ENST00000589216 PSPHP1O15172 72 aa3.48□□□□□ -1.85
PTPN2-208ENST00000589216 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
PTPN2-208ENST00000589216 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
PTPN2-208ENST00000589216 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
PTPN2-208ENST00000589216 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
PTPN2-208ENST00000589216 Q1T7F1 81 aa3.44□□□□□ -1.86
PTPN2-208ENST00000589216 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
PTPN2-208ENST00000589216 V9GYY9 64 aa3.41□□□□□ -1.86
PTPN2-208ENST00000589216 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
PTPN2-208ENST00000589216 K7ERS5 55 aa3.34□□□□□ -1.87
PTPN2-208ENST00000589216 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
PTPN2-208ENST00000589216 A6NED7 52 aa3.33□□□□□ -1.88
PTPN2-208ENST00000589216 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
PTPN2-208ENST00000589216 MT4P47944 62 aa3.32□□□□□ -1.88
PTPN2-208ENST00000589216 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
PTPN2-208ENST00000589216 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
PTPN2-208ENST00000589216 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
PTPN2-208ENST00000589216 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
PTPN2-208ENST00000589216 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
PTPN2-208ENST00000589216 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
PTPN2-208ENST00000589216 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
PTPN2-208ENST00000589216 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
PTPN2-208ENST00000589216 ROMO1P60602 79 aa3.18□□□□□ -1.9
PTPN2-208ENST00000589216 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
PTPN2-208ENST00000589216 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
PTPN2-208ENST00000589216 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PTPN2-208ENST00000589216 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
PTPN2-208ENST00000589216 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
PTPN2-208ENST00000589216 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
PTPN2-208ENST00000589216 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
PTPN2-208ENST00000589216 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
PTPN2-208ENST00000589216 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
PTPN2-208ENST00000589216 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
PTPN2-208ENST00000589216 MT1AP04731 61 aa2.99□□□□□ -1.93
PTPN2-208ENST00000589216 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
PTPN2-208ENST00000589216 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
PTPN2-208ENST00000589216 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
PTPN2-208ENST00000589216 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
PTPN2-208ENST00000589216 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
PTPN2-208ENST00000589216 MT3P25713 68 aa2.84□□□□□ -1.95
PTPN2-208ENST00000589216 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
PTPN2-208ENST00000589216 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
PTPN2-208ENST00000589216 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
PTPN2-208ENST00000589216 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
PTPN2-208ENST00000589216 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PTPN2-208ENST00000589216 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
PTPN2-208ENST00000589216 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
PTPN2-208ENST00000589216 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
PTPN2-208ENST00000589216 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
PTPN2-208ENST00000589216 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
PTPN2-208ENST00000589216 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
PTPN2-208ENST00000589216 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PTPN2-208ENST00000589216 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
PTPN2-208ENST00000589216 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
PTPN2-208ENST00000589216 INE1O15225 51 aa2.1□□□□□ -2.07
PTPN2-208ENST00000589216 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
PTPN2-208ENST00000589216 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
PTPN2-208ENST00000589216 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
PTPN2-208ENST00000589216 PRM1P04553 51 aa1.66□□□□□ -2.14
PTPN2-208ENST00000589216 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
PTPN2-208ENST00000589216 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 88.2 ms