RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	KRTAP4-3	Q9BYR4	195 aa		6.82	□□□□□ -1.32
SEPT9-223	ENST00000589140	MT4	P47944	62 aa		6.81	□□□□□ -1.32
SEPT9-223	ENST00000589140	ATP5E	P56381	51 aa	Predicted RBP	6.8	□□□□□ -1.32
SEPT9-223	ENST00000589140	LINC01558	Q9Y6Z2	57 aa		6.76	□□□□□ -1.33
SEPT9-223	ENST00000589140	KRTAP5-4	Q6L8H1	288 aa		6.74	□□□□□ -1.33
SEPT9-223	ENST00000589140	AHNAK2	Q8IVF2	5795 aa		6.68	□□□□□ -1.34
SEPT9-223	ENST00000589140	KRTAP12-3	P60328	96 aa		6.67	□□□□□ -1.34
SEPT9-223	ENST00000589140	KRTAP4-7	Q9BYR0	210 aa		6.63	□□□□□ -1.35
SEPT9-223	ENST00000589140	UQCR11	O14957	56 aa		6.62	□□□□□ -1.35
SEPT9-223	ENST00000589140	KRTAP4-6	Q9BYQ5	205 aa		6.62	□□□□□ -1.35
SEPT9-223	ENST00000589140	TMEM258	P61165	79 aa		6.56	□□□□□ -1.36
SEPT9-223	ENST00000589140	KRTAP5-10	Q6L8G5	202 aa		6.49	□□□□□ -1.37
SEPT9-223	ENST00000589140	KRTAP25-1	Q3LHN0	102 aa		6.48	□□□□□ -1.37
SEPT9-223	ENST00000589140	MIR22HG	Q0VDD5	57 aa		6.45	□□□□□ -1.38
SEPT9-223	ENST00000589140	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.43	□□□□□ -1.38
SEPT9-223	ENST00000589140	KRTAP20-2	Q3LI61	65 aa		6.37	□□□□□ -1.39
SEPT9-223	ENST00000589140		K7ERS5	55 aa		6.36	□□□□□ -1.39
SEPT9-223	ENST00000589140	SPRR5	A0A1B0GTR4	108 aa		6.33	□□□□□ -1.4
SEPT9-223	ENST00000589140	KRTAP5-3	Q6L8H2	238 aa		6.32	□□□□□ -1.4
SEPT9-223	ENST00000589140	KRTAP19-4	Q3LI73	84 aa		6.31	□□□□□ -1.4
SEPT9-223	ENST00000589140	LOC100996750	A0A140TA64	210 aa		6.28	□□□□□ -1.4
SEPT9-223	ENST00000589140	PCP4	P48539	62 aa		6.28	□□□□□ -1.4
SEPT9-223	ENST00000589140	KRTAP12-4	P60329	112 aa		6.28	□□□□□ -1.4
SEPT9-223	ENST00000589140	KRTAP5-7	Q6L8G8	165 aa		6.26	□□□□□ -1.41
SEPT9-223	ENST00000589140	SYNE1	Q8NF91	8797 aa	Known RBP	6.26	□□□□□ -1.41
SEPT9-223	ENST00000589140		V9GYY9	64 aa		6.25	□□□□□ -1.41
SEPT9-223	ENST00000589140	KRTAP23-1	A1A580	65 aa		6.24	□□□□□ -1.41
SEPT9-223	ENST00000589140	PSPHP1	O15172	72 aa		6.24	□□□□□ -1.41
SEPT9-223	ENST00000589140		Q1T7F1	81 aa		6.19	□□□□□ -1.42
SEPT9-223	ENST00000589140	KRTAP15-1	Q3LI76	137 aa		6.19	□□□□□ -1.42
SEPT9-223	ENST00000589140	LCE3C	Q5T5A8	94 aa		6.13	□□□□□ -1.43
SEPT9-223	ENST00000589140		A6NED7	52 aa		6.03	□□□□□ -1.44
SEPT9-223	ENST00000589140	CDC42SE1	Q9NRR8	79 aa		6	□□□□□ -1.45
SEPT9-223	ENST00000589140	MT1A	P04731	61 aa		5.94	□□□□□ -1.46
SEPT9-223	ENST00000589140	ROMO1	P60602	79 aa		5.91	□□□□□ -1.46
SEPT9-223	ENST00000589140	KRTAP6-1	Q3LI64	71 aa		5.91	□□□□□ -1.46
SEPT9-223	ENST00000589140	KRTAP5-2	Q701N4	177 aa		5.89	□□□□□ -1.47
SEPT9-223	ENST00000589140	RPS28	P62857	69 aa	Known RBP	5.86	□□□□□ -1.47
SEPT9-223	ENST00000589140	KRTAP4-11	Q9BYQ6	195 aa		5.84	□□□□□ -1.47
SEPT9-223	ENST00000589140	KRTAP9-6	A8MVA2	160 aa		5.79	□□□□□ -1.48
SEPT9-223	ENST00000589140	KRTAP9-4	Q9BYQ2	154 aa		5.75	□□□□□ -1.49
SEPT9-223	ENST00000589140	KRTAP6-2	Q3LI66	62 aa		5.67	□□□□□ -1.5
SEPT9-223	ENST00000589140	KRTAP5-8	O75690	187 aa		5.65	□□□□□ -1.5
SEPT9-223	ENST00000589140	OBSCN	Q5VST9	7968 aa		5.6	□□□□□ -1.51
SEPT9-223	ENST00000589140	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.53	□□□□□ -1.52
SEPT9-223	ENST00000589140	AHNAK	Q09666	5890 aa	Known RBP	5.53	□□□□□ -1.52
SEPT9-223	ENST00000589140	MUC5AC	P98088	5654 aa		5.48	□□□□□ -1.53
SEPT9-223	ENST00000589140	MT3	P25713	68 aa		5.44	□□□□□ -1.54
SEPT9-223	ENST00000589140	KRTAP9-9	Q9BYP9	154 aa		5.37	□□□□□ -1.55
SEPT9-223	ENST00000589140	KRTAP5-1	Q6L8H4	278 aa		5.3	□□□□□ -1.56
SEPT9-223	ENST00000589140	SVIP	Q8NHG7	77 aa		5.23	□□□□□ -1.57
SEPT9-223	ENST00000589140	PRO0628	Q9UI54	55 aa		5.1	□□□□□ -1.59
SEPT9-223	ENST00000589140	LCE1E	Q5T753	118 aa		5.04	□□□□□ -1.6
SEPT9-223	ENST00000589140	BRK1	Q8WUW1	75 aa		5.04	□□□□□ -1.6
SEPT9-223	ENST00000589140	PMAIP1	Q13794	54 aa		4.77	□□□□□ -1.65
SEPT9-223	ENST00000589140	KRTAP4-2	Q9BYR5	136 aa		4.77	□□□□□ -1.65
SEPT9-223	ENST00000589140	LCE1B	Q5T7P3	118 aa		4.73	□□□□□ -1.65
SEPT9-223	ENST00000589140	KTN1-AS1	Q86SY8	53 aa		4.7	□□□□□ -1.66
SEPT9-223	ENST00000589140	LCE1C	Q5T751	118 aa		4.67	□□□□□ -1.66
SEPT9-223	ENST00000589140	PRAC1	Q96KF2	57 aa		4.54	□□□□□ -1.68
SEPT9-223	ENST00000589140	KRTAP4-12	Q9BQ66	201 aa		4.51	□□□□□ -1.69
SEPT9-223	ENST00000589140	LCE3D	Q9BYE3	92 aa		4.39	□□□□□ -1.71
SEPT9-223	ENST00000589140	KRTAP5-11	Q6L8G4	156 aa		4.25	□□□□□ -1.73
SEPT9-223	ENST00000589140	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.25	□□□□□ -1.73
SEPT9-223	ENST00000589140		H3BS24	57 aa		4.16	□□□□□ -1.74
SEPT9-223	ENST00000589140	LCE1F	Q5T754	118 aa		4.16	□□□□□ -1.74
SEPT9-223	ENST00000589140	LCE3E	Q5T5B0	92 aa		4.11	□□□□□ -1.75
SEPT9-223	ENST00000589140	KRTAP21-2	Q3LI59	83 aa		3.9	□□□□□ -1.79
SEPT9-223	ENST00000589140	LUZP6	Q538Z0	58 aa		3.88	□□□□□ -1.79
SEPT9-223	ENST00000589140	PHGR1	C9JFL3	82 aa		3.78	□□□□□ -1.8
SEPT9-223	ENST00000589140	NDUFAF8	A1L188	74 aa		3.64	□□□□□ -1.83
SEPT9-223	ENST00000589140	KRTAP4-4	Q9BYR3	166 aa		3.57	□□□□□ -1.84
SEPT9-223	ENST00000589140	MUC19	Q7Z5P9	8384 aa		3.47	□□□□□ -1.85
SEPT9-223	ENST00000589140		A0A0A0MQY5	61 aa		3.31	□□□□□ -1.88
SEPT9-223	ENST00000589140	INE1	O15225	51 aa		3.09	□□□□□ -1.91
SEPT9-223	ENST00000589140	PRM1	P04553	51 aa		3	□□□□□ -1.93
SEPT9-223	ENST00000589140	KRTAP21-1	Q3LI58	79 aa		2.87	□□□□□ -1.95
SEPT9-223	ENST00000589140	MUC16	Q8WXI7	14507 aa		2.4	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 53 ms