RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 A8MU10 97 aa5.39□□□□□ -1.55
TRAPPC6A-204ENST00000588062 TMEM258P61165 79 aa5.36□□□□□ -1.55
TRAPPC6A-204ENST00000588062 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
TRAPPC6A-204ENST00000588062 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
TRAPPC6A-204ENST00000588062 TNP1P09430 55 aa5.33□□□□□ -1.56
TRAPPC6A-204ENST00000588062 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
TRAPPC6A-204ENST00000588062 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
TRAPPC6A-204ENST00000588062 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
TRAPPC6A-204ENST00000588062 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
TRAPPC6A-204ENST00000588062 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
TRAPPC6A-204ENST00000588062 UQCR11O14957 56 aa5.15□□□□□ -1.59
TRAPPC6A-204ENST00000588062 PCP4P48539 62 aa5.15□□□□□ -1.59
TRAPPC6A-204ENST00000588062 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
TRAPPC6A-204ENST00000588062 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC6A-204ENST00000588062 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
TRAPPC6A-204ENST00000588062 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
TRAPPC6A-204ENST00000588062 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
TRAPPC6A-204ENST00000588062 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
TRAPPC6A-204ENST00000588062 Q1T7F1 81 aa5.03□□□□□ -1.6
TRAPPC6A-204ENST00000588062 V9GYY9 64 aa5.02□□□□□ -1.61
TRAPPC6A-204ENST00000588062 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
TRAPPC6A-204ENST00000588062 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
TRAPPC6A-204ENST00000588062 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
TRAPPC6A-204ENST00000588062 PSPHP1O15172 72 aa4.98□□□□□ -1.61
TRAPPC6A-204ENST00000588062 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
TRAPPC6A-204ENST00000588062 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
TRAPPC6A-204ENST00000588062 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
TRAPPC6A-204ENST00000588062 K7ERS5 55 aa4.88□□□□□ -1.63
TRAPPC6A-204ENST00000588062 A6NED7 52 aa4.8□□□□□ -1.64
TRAPPC6A-204ENST00000588062 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
TRAPPC6A-204ENST00000588062 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
TRAPPC6A-204ENST00000588062 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
TRAPPC6A-204ENST00000588062 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
TRAPPC6A-204ENST00000588062 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
TRAPPC6A-204ENST00000588062 MT1AP04731 61 aa4.69□□□□□ -1.66
TRAPPC6A-204ENST00000588062 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
TRAPPC6A-204ENST00000588062 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
TRAPPC6A-204ENST00000588062 ROMO1P60602 79 aa4.61□□□□□ -1.67
TRAPPC6A-204ENST00000588062 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
TRAPPC6A-204ENST00000588062 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
TRAPPC6A-204ENST00000588062 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
TRAPPC6A-204ENST00000588062 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
TRAPPC6A-204ENST00000588062 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
TRAPPC6A-204ENST00000588062 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.69
TRAPPC6A-204ENST00000588062 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC6A-204ENST00000588062 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
TRAPPC6A-204ENST00000588062 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
TRAPPC6A-204ENST00000588062 MT3P25713 68 aa4.28□□□□□ -1.72
TRAPPC6A-204ENST00000588062 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
TRAPPC6A-204ENST00000588062 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
TRAPPC6A-204ENST00000588062 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
TRAPPC6A-204ENST00000588062 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
TRAPPC6A-204ENST00000588062 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
TRAPPC6A-204ENST00000588062 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
TRAPPC6A-204ENST00000588062 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
TRAPPC6A-204ENST00000588062 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
TRAPPC6A-204ENST00000588062 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
TRAPPC6A-204ENST00000588062 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
TRAPPC6A-204ENST00000588062 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
TRAPPC6A-204ENST00000588062 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
TRAPPC6A-204ENST00000588062 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
TRAPPC6A-204ENST00000588062 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
TRAPPC6A-204ENST00000588062 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC6A-204ENST00000588062 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TRAPPC6A-204ENST00000588062 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
TRAPPC6A-204ENST00000588062 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
TRAPPC6A-204ENST00000588062 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
TRAPPC6A-204ENST00000588062 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
TRAPPC6A-204ENST00000588062 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
TRAPPC6A-204ENST00000588062 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TRAPPC6A-204ENST00000588062 H3BS24 57 aa2.83□□□□□ -1.96
TRAPPC6A-204ENST00000588062 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
TRAPPC6A-204ENST00000588062 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
TRAPPC6A-204ENST00000588062 INE1O15225 51 aa2.52□□□□□ -2.01
TRAPPC6A-204ENST00000588062 PRM1P04553 51 aa2.37□□□□□ -2.03
TRAPPC6A-204ENST00000588062 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
TRAPPC6A-204ENST00000588062 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms