RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SPRR2DP22532 72 aa3.84□□□□□ -1.79
SMARCA4-213ENST00000587988 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
SMARCA4-213ENST00000587988 MT1LQ93083 61 aa3.83□□□□□ -1.8
SMARCA4-213ENST00000587988 MT1GP13640 62 aa3.79□□□□□ -1.8
SMARCA4-213ENST00000587988 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
SMARCA4-213ENST00000587988 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
SMARCA4-213ENST00000587988 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
SMARCA4-213ENST00000587988 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
SMARCA4-213ENST00000587988 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
SMARCA4-213ENST00000587988 MT1MQ8N339 61 aa3.74□□□□□ -1.81
SMARCA4-213ENST00000587988 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
SMARCA4-213ENST00000587988 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
SMARCA4-213ENST00000587988 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
SMARCA4-213ENST00000587988 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
SMARCA4-213ENST00000587988 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
SMARCA4-213ENST00000587988 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SMARCA4-213ENST00000587988 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
SMARCA4-213ENST00000587988 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
SMARCA4-213ENST00000587988 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
SMARCA4-213ENST00000587988 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
SMARCA4-213ENST00000587988 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SMARCA4-213ENST00000587988 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
SMARCA4-213ENST00000587988 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
SMARCA4-213ENST00000587988 MT4P47944 62 aa3.35□□□□□ -1.87
SMARCA4-213ENST00000587988 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
SMARCA4-213ENST00000587988 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
SMARCA4-213ENST00000587988 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
SMARCA4-213ENST00000587988 MT1AP04731 61 aa3.25□□□□□ -1.89
SMARCA4-213ENST00000587988 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
SMARCA4-213ENST00000587988 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
SMARCA4-213ENST00000587988 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
SMARCA4-213ENST00000587988 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
SMARCA4-213ENST00000587988 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
SMARCA4-213ENST00000587988 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SMARCA4-213ENST00000587988 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
SMARCA4-213ENST00000587988 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
SMARCA4-213ENST00000587988 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
SMARCA4-213ENST00000587988 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
SMARCA4-213ENST00000587988 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
SMARCA4-213ENST00000587988 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SMARCA4-213ENST00000587988 MT3P25713 68 aa2.95□□□□□ -1.94
SMARCA4-213ENST00000587988 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
SMARCA4-213ENST00000587988 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
SMARCA4-213ENST00000587988 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
SMARCA4-213ENST00000587988 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
SMARCA4-213ENST00000587988 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
SMARCA4-213ENST00000587988 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
SMARCA4-213ENST00000587988 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SMARCA4-213ENST00000587988 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
SMARCA4-213ENST00000587988 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
SMARCA4-213ENST00000587988 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SMARCA4-213ENST00000587988 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
SMARCA4-213ENST00000587988 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SMARCA4-213ENST00000587988 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SMARCA4-213ENST00000587988 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
SMARCA4-213ENST00000587988 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
SMARCA4-213ENST00000587988 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SMARCA4-213ENST00000587988 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
SMARCA4-213ENST00000587988 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
SMARCA4-213ENST00000587988 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
SMARCA4-213ENST00000587988 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
SMARCA4-213ENST00000587988 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
SMARCA4-213ENST00000587988 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
SMARCA4-213ENST00000587988 INE1O15225 51 aa2.14□□□□□ -2.07
SMARCA4-213ENST00000587988 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SMARCA4-213ENST00000587988 PRM1P04553 51 aa2.07□□□□□ -2.08
SMARCA4-213ENST00000587988 H3BS24 57 aa2.06□□□□□ -2.08
SMARCA4-213ENST00000587988 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
SMARCA4-213ENST00000587988 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SMARCA4-213ENST00000587988 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SMARCA4-213ENST00000587988 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
SMARCA4-213ENST00000587988 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
SMARCA4-213ENST00000587988 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 103.3 ms