RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
RANBP3-209ENST00000587411 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
RANBP3-209ENST00000587411 MT1GP13640 62 aa5.21□□□□□ -1.58
RANBP3-209ENST00000587411 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.58
RANBP3-209ENST00000587411 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
RANBP3-209ENST00000587411 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
RANBP3-209ENST00000587411 MT1MQ8N339 61 aa5.16□□□□□ -1.58
RANBP3-209ENST00000587411 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
RANBP3-209ENST00000587411 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
RANBP3-209ENST00000587411 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
RANBP3-209ENST00000587411 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
RANBP3-209ENST00000587411 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
RANBP3-209ENST00000587411 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
RANBP3-209ENST00000587411 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
RANBP3-209ENST00000587411 MT1AP04731 61 aa4.9□□□□□ -1.62
RANBP3-209ENST00000587411 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
RANBP3-209ENST00000587411 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
RANBP3-209ENST00000587411 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
RANBP3-209ENST00000587411 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
RANBP3-209ENST00000587411 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
RANBP3-209ENST00000587411 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
RANBP3-209ENST00000587411 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
RANBP3-209ENST00000587411 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
RANBP3-209ENST00000587411 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
RANBP3-209ENST00000587411 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
RANBP3-209ENST00000587411 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
RANBP3-209ENST00000587411 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.66
RANBP3-209ENST00000587411 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
RANBP3-209ENST00000587411 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
RANBP3-209ENST00000587411 PRM1P04553 51 aa4.62□□□□□ -1.67
RANBP3-209ENST00000587411 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
RANBP3-209ENST00000587411 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
RANBP3-209ENST00000587411 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
RANBP3-209ENST00000587411 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
RANBP3-209ENST00000587411 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
RANBP3-209ENST00000587411 SPRR2EP22531 72 aa4.47□□□□□ -1.69
RANBP3-209ENST00000587411 SPRR2BP35325 72 aa4.47□□□□□ -1.69
RANBP3-209ENST00000587411 SPRR2AP35326 72 aa4.47□□□□□ -1.69
RANBP3-209ENST00000587411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
RANBP3-209ENST00000587411 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.7
RANBP3-209ENST00000587411 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
RANBP3-209ENST00000587411 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
RANBP3-209ENST00000587411 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
RANBP3-209ENST00000587411 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
RANBP3-209ENST00000587411 SPRR2DP22532 72 aa4.28□□□□□ -1.72
RANBP3-209ENST00000587411 MT3P25713 68 aa4.22□□□□□ -1.73
RANBP3-209ENST00000587411 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
RANBP3-209ENST00000587411 NEBP20929 6669 aa4.06□□□□□ -1.76
RANBP3-209ENST00000587411 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
RANBP3-209ENST00000587411 MT4P47944 62 aa3.81□□□□□ -1.8
RANBP3-209ENST00000587411 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
RANBP3-209ENST00000587411 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
RANBP3-209ENST00000587411 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
RANBP3-209ENST00000587411 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
RANBP3-209ENST00000587411 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
RANBP3-209ENST00000587411 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
RANBP3-209ENST00000587411 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
RANBP3-209ENST00000587411 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
RANBP3-209ENST00000587411 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
RANBP3-209ENST00000587411 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
RANBP3-209ENST00000587411 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
RANBP3-209ENST00000587411 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
RANBP3-209ENST00000587411 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
RANBP3-209ENST00000587411 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
RANBP3-209ENST00000587411 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
RANBP3-209ENST00000587411 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
RANBP3-209ENST00000587411 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
RANBP3-209ENST00000587411 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
RANBP3-209ENST00000587411 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
RANBP3-209ENST00000587411 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
RANBP3-209ENST00000587411 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
RANBP3-209ENST00000587411 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
RANBP3-209ENST00000587411 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
RANBP3-209ENST00000587411 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
RANBP3-209ENST00000587411 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
RANBP3-209ENST00000587411 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
RANBP3-209ENST00000587411 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
RANBP3-209ENST00000587411 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 246.2 ms