RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
CLPTM1-204ENST00000585961 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
CLPTM1-204ENST00000585961 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
CLPTM1-204ENST00000585961 A0A1B0GU69 56 aa6.72□□□□□ -1.33
CLPTM1-204ENST00000585961 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
CLPTM1-204ENST00000585961 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
CLPTM1-204ENST00000585961 H7BZZ5 65 aa6.62□□□□□ -1.35
CLPTM1-204ENST00000585961 COX7CP15954 63 aa6.61□□□□□ -1.35
CLPTM1-204ENST00000585961 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
CLPTM1-204ENST00000585961 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
CLPTM1-204ENST00000585961 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
CLPTM1-204ENST00000585961 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
CLPTM1-204ENST00000585961 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
CLPTM1-204ENST00000585961 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
CLPTM1-204ENST00000585961 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
CLPTM1-204ENST00000585961 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
CLPTM1-204ENST00000585961 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
CLPTM1-204ENST00000585961 ANAPC13Q9BS18 74 aa6.17□□□□□ -1.42
CLPTM1-204ENST00000585961 UQCR11O14957 56 aa6.15□□□□□ -1.42
CLPTM1-204ENST00000585961 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
CLPTM1-204ENST00000585961 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
CLPTM1-204ENST00000585961 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
CLPTM1-204ENST00000585961 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
CLPTM1-204ENST00000585961 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
CLPTM1-204ENST00000585961 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
CLPTM1-204ENST00000585961 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
CLPTM1-204ENST00000585961 MT1AP04731 61 aa6.01□□□□□ -1.45
CLPTM1-204ENST00000585961 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
CLPTM1-204ENST00000585961 KRTAP5-8O75690 187 aa5.99□□□□□ -1.45
CLPTM1-204ENST00000585961 K7ERS5 55 aa5.93□□□□□ -1.46
CLPTM1-204ENST00000585961 AHNAKQ09666 5890 aaKnown RBP5.92□□□□□ -1.46
CLPTM1-204ENST00000585961 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
CLPTM1-204ENST00000585961 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
CLPTM1-204ENST00000585961 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
CLPTM1-204ENST00000585961 KRTAP6-2Q3LI66 62 aa5.88□□□□□ -1.47
CLPTM1-204ENST00000585961 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
CLPTM1-204ENST00000585961 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
CLPTM1-204ENST00000585961 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
CLPTM1-204ENST00000585961 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
CLPTM1-204ENST00000585961 TMEM258P61165 79 aa5.74□□□□□ -1.49
CLPTM1-204ENST00000585961 PSPHP1O15172 72 aa5.73□□□□□ -1.49
CLPTM1-204ENST00000585961 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
CLPTM1-204ENST00000585961 Q1T7F1 81 aa5.59□□□□□ -1.51
CLPTM1-204ENST00000585961 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
CLPTM1-204ENST00000585961 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
CLPTM1-204ENST00000585961 MT3P25713 68 aa5.54□□□□□ -1.52
CLPTM1-204ENST00000585961 V9GYY9 64 aa5.53□□□□□ -1.52
CLPTM1-204ENST00000585961 ROMO1P60602 79 aa5.48□□□□□ -1.53
CLPTM1-204ENST00000585961 A6NED7 52 aa5.46□□□□□ -1.54
CLPTM1-204ENST00000585961 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
CLPTM1-204ENST00000585961 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
CLPTM1-204ENST00000585961 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
CLPTM1-204ENST00000585961 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
CLPTM1-204ENST00000585961 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
CLPTM1-204ENST00000585961 PCP4P48539 62 aa4.32□□□□□ -1.72
CLPTM1-204ENST00000585961 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
CLPTM1-204ENST00000585961 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
CLPTM1-204ENST00000585961 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
CLPTM1-204ENST00000585961 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
CLPTM1-204ENST00000585961 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
CLPTM1-204ENST00000585961 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
CLPTM1-204ENST00000585961 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CLPTM1-204ENST00000585961 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
CLPTM1-204ENST00000585961 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
CLPTM1-204ENST00000585961 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
CLPTM1-204ENST00000585961 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
CLPTM1-204ENST00000585961 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
CLPTM1-204ENST00000585961 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
CLPTM1-204ENST00000585961 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
CLPTM1-204ENST00000585961 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
CLPTM1-204ENST00000585961 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
CLPTM1-204ENST00000585961 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
CLPTM1-204ENST00000585961 PRM1P04553 51 aa2.82□□□□□ -1.96
CLPTM1-204ENST00000585961 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
CLPTM1-204ENST00000585961 H3BS24 57 aa2.56□□□□□ -2
CLPTM1-204ENST00000585961 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
CLPTM1-204ENST00000585961 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
CLPTM1-204ENST00000585961 INE1O15225 51 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 355.5 ms