RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
HMG20B-216ENST00000585900 MT4P47944 62 aa6.3□□□□□ -1.4
HMG20B-216ENST00000585900 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
HMG20B-216ENST00000585900 UQCR11O14957 56 aa6.27□□□□□ -1.41
HMG20B-216ENST00000585900 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
HMG20B-216ENST00000585900 TMEM258P61165 79 aa6.24□□□□□ -1.41
HMG20B-216ENST00000585900 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
HMG20B-216ENST00000585900 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
HMG20B-216ENST00000585900 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
HMG20B-216ENST00000585900 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
HMG20B-216ENST00000585900 K7ERS5 55 aa6.09□□□□□ -1.43
HMG20B-216ENST00000585900 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
HMG20B-216ENST00000585900 AHNAK2Q8IVF2 5795 aa6.09□□□□□ -1.44
HMG20B-216ENST00000585900 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
HMG20B-216ENST00000585900 V9GYY9 64 aa5.96□□□□□ -1.46
HMG20B-216ENST00000585900 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
HMG20B-216ENST00000585900 PSPHP1O15172 72 aa5.92□□□□□ -1.46
HMG20B-216ENST00000585900 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
HMG20B-216ENST00000585900 PCP4P48539 62 aa5.89□□□□□ -1.47
HMG20B-216ENST00000585900 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
HMG20B-216ENST00000585900 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
HMG20B-216ENST00000585900 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
HMG20B-216ENST00000585900 Q1T7F1 81 aa5.85□□□□□ -1.47
HMG20B-216ENST00000585900 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
HMG20B-216ENST00000585900 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
HMG20B-216ENST00000585900 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
HMG20B-216ENST00000585900 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
HMG20B-216ENST00000585900 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
HMG20B-216ENST00000585900 A6NED7 52 aa5.75□□□□□ -1.49
HMG20B-216ENST00000585900 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
HMG20B-216ENST00000585900 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
HMG20B-216ENST00000585900 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
HMG20B-216ENST00000585900 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
HMG20B-216ENST00000585900 ROMO1P60602 79 aa5.58□□□□□ -1.52
HMG20B-216ENST00000585900 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
HMG20B-216ENST00000585900 MT1AP04731 61 aa5.51□□□□□ -1.53
HMG20B-216ENST00000585900 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
HMG20B-216ENST00000585900 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
HMG20B-216ENST00000585900 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
HMG20B-216ENST00000585900 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
HMG20B-216ENST00000585900 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
HMG20B-216ENST00000585900 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
HMG20B-216ENST00000585900 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
HMG20B-216ENST00000585900 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
HMG20B-216ENST00000585900 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
HMG20B-216ENST00000585900 MT3P25713 68 aa5.06□□□□□ -1.6
HMG20B-216ENST00000585900 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
HMG20B-216ENST00000585900 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
HMG20B-216ENST00000585900 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
HMG20B-216ENST00000585900 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
HMG20B-216ENST00000585900 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
HMG20B-216ENST00000585900 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
HMG20B-216ENST00000585900 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
HMG20B-216ENST00000585900 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
HMG20B-216ENST00000585900 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
HMG20B-216ENST00000585900 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
HMG20B-216ENST00000585900 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
HMG20B-216ENST00000585900 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
HMG20B-216ENST00000585900 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
HMG20B-216ENST00000585900 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
HMG20B-216ENST00000585900 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
HMG20B-216ENST00000585900 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
HMG20B-216ENST00000585900 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
HMG20B-216ENST00000585900 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
HMG20B-216ENST00000585900 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
HMG20B-216ENST00000585900 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
HMG20B-216ENST00000585900 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
HMG20B-216ENST00000585900 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
HMG20B-216ENST00000585900 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
HMG20B-216ENST00000585900 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
HMG20B-216ENST00000585900 H3BS24 57 aa3.35□□□□□ -1.87
HMG20B-216ENST00000585900 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
HMG20B-216ENST00000585900 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
HMG20B-216ENST00000585900 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
HMG20B-216ENST00000585900 PRM1P04553 51 aa2.83□□□□□ -1.96
HMG20B-216ENST00000585900 INE1O15225 51 aa2.75□□□□□ -1.97
HMG20B-216ENST00000585900 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
HMG20B-216ENST00000585900 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 94.1 ms