RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
AP3D1-203ENST00000585652 USH2AO75445 5202 aa4.35□□□□□ -1.71
AP3D1-203ENST00000585652 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
AP3D1-203ENST00000585652 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
AP3D1-203ENST00000585652 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
AP3D1-203ENST00000585652 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
AP3D1-203ENST00000585652 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
AP3D1-203ENST00000585652 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
AP3D1-203ENST00000585652 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
AP3D1-203ENST00000585652 KMT2DO14686 5537 aa4.22□□□□□ -1.73
AP3D1-203ENST00000585652 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
AP3D1-203ENST00000585652 SPRR2DP22532 72 aa4.2□□□□□ -1.74
AP3D1-203ENST00000585652 MT1MQ8N339 61 aa4.2□□□□□ -1.74
AP3D1-203ENST00000585652 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
AP3D1-203ENST00000585652 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
AP3D1-203ENST00000585652 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
AP3D1-203ENST00000585652 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
AP3D1-203ENST00000585652 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
AP3D1-203ENST00000585652 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
AP3D1-203ENST00000585652 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
AP3D1-203ENST00000585652 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
AP3D1-203ENST00000585652 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
AP3D1-203ENST00000585652 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
AP3D1-203ENST00000585652 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
AP3D1-203ENST00000585652 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
AP3D1-203ENST00000585652 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
AP3D1-203ENST00000585652 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
AP3D1-203ENST00000585652 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
AP3D1-203ENST00000585652 PRM1P04553 51 aa3.81□□□□□ -1.8
AP3D1-203ENST00000585652 MT4P47944 62 aa3.81□□□□□ -1.8
AP3D1-203ENST00000585652 MT1AP04731 61 aa3.8□□□□□ -1.8
AP3D1-203ENST00000585652 MT3P25713 68 aa3.78□□□□□ -1.8
AP3D1-203ENST00000585652 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
AP3D1-203ENST00000585652 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
AP3D1-203ENST00000585652 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
AP3D1-203ENST00000585652 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
AP3D1-203ENST00000585652 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
AP3D1-203ENST00000585652 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
AP3D1-203ENST00000585652 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
AP3D1-203ENST00000585652 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
AP3D1-203ENST00000585652 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
AP3D1-203ENST00000585652 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
AP3D1-203ENST00000585652 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
AP3D1-203ENST00000585652 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
AP3D1-203ENST00000585652 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
AP3D1-203ENST00000585652 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
AP3D1-203ENST00000585652 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
AP3D1-203ENST00000585652 NEBP20929 6669 aa3.24□□□□□ -1.89
AP3D1-203ENST00000585652 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
AP3D1-203ENST00000585652 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
AP3D1-203ENST00000585652 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
AP3D1-203ENST00000585652 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
AP3D1-203ENST00000585652 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
AP3D1-203ENST00000585652 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
AP3D1-203ENST00000585652 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
AP3D1-203ENST00000585652 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
AP3D1-203ENST00000585652 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
AP3D1-203ENST00000585652 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
AP3D1-203ENST00000585652 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
AP3D1-203ENST00000585652 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
AP3D1-203ENST00000585652 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
AP3D1-203ENST00000585652 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
AP3D1-203ENST00000585652 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
AP3D1-203ENST00000585652 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
AP3D1-203ENST00000585652 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
AP3D1-203ENST00000585652 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
AP3D1-203ENST00000585652 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
AP3D1-203ENST00000585652 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
AP3D1-203ENST00000585652 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
AP3D1-203ENST00000585652 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
AP3D1-203ENST00000585652 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
AP3D1-203ENST00000585652 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
AP3D1-203ENST00000585652 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
AP3D1-203ENST00000585652 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
AP3D1-203ENST00000585652 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
AP3D1-203ENST00000585652 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
AP3D1-203ENST00000585652 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
AP3D1-203ENST00000585652 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms