RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SPANXA2-OT1Q8N9U9 137 aa5.09□□□□□ -1.59
SDF2-202ENST00000585428 SNURFQ9Y675 71 aa5.08□□□□□ -1.6
SDF2-202ENST00000585428 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
SDF2-202ENST00000585428 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
SDF2-202ENST00000585428 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
SDF2-202ENST00000585428 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
SDF2-202ENST00000585428 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
SDF2-202ENST00000585428 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
SDF2-202ENST00000585428 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
SDF2-202ENST00000585428 SERP1Q9Y6X1 66 aa4.98□□□□□ -1.61
SDF2-202ENST00000585428 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
SDF2-202ENST00000585428 SEC61GP60059 68 aa4.97□□□□□ -1.61
SDF2-202ENST00000585428 A0A1B0GU33 70 aa4.95□□□□□ -1.62
SDF2-202ENST00000585428 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
SDF2-202ENST00000585428 COA5Q86WW8 74 aa4.94□□□□□ -1.62
SDF2-202ENST00000585428 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
SDF2-202ENST00000585428 COX7CP15954 63 aa4.93□□□□□ -1.62
SDF2-202ENST00000585428 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SDF2-202ENST00000585428 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
SDF2-202ENST00000585428 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
SDF2-202ENST00000585428 TNP1P09430 55 aa4.83□□□□□ -1.64
SDF2-202ENST00000585428 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
SDF2-202ENST00000585428 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
SDF2-202ENST00000585428 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
SDF2-202ENST00000585428 TMEM258P61165 79 aa4.78□□□□□ -1.64
SDF2-202ENST00000585428 A8MU10 97 aa4.77□□□□□ -1.65
SDF2-202ENST00000585428 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
SDF2-202ENST00000585428 H7BZZ5 65 aa4.74□□□□□ -1.65
SDF2-202ENST00000585428 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
SDF2-202ENST00000585428 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
SDF2-202ENST00000585428 A0A1B0GU69 56 aa4.69□□□□□ -1.66
SDF2-202ENST00000585428 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
SDF2-202ENST00000585428 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
SDF2-202ENST00000585428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
SDF2-202ENST00000585428 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SDF2-202ENST00000585428 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SDF2-202ENST00000585428 Q1T7F1 81 aa4.44□□□□□ -1.7
SDF2-202ENST00000585428 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
SDF2-202ENST00000585428 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
SDF2-202ENST00000585428 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
SDF2-202ENST00000585428 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
SDF2-202ENST00000585428 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
SDF2-202ENST00000585428 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
SDF2-202ENST00000585428 V9GYY9 64 aa4.37□□□□□ -1.71
SDF2-202ENST00000585428 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SDF2-202ENST00000585428 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
SDF2-202ENST00000585428 MT1AP04731 61 aa4.34□□□□□ -1.71
SDF2-202ENST00000585428 UQCR11O14957 56 aa4.31□□□□□ -1.72
SDF2-202ENST00000585428 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
SDF2-202ENST00000585428 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
SDF2-202ENST00000585428 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
SDF2-202ENST00000585428 PSPHP1O15172 72 aa4.25□□□□□ -1.73
SDF2-202ENST00000585428 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
SDF2-202ENST00000585428 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
SDF2-202ENST00000585428 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
SDF2-202ENST00000585428 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
SDF2-202ENST00000585428 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
SDF2-202ENST00000585428 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SDF2-202ENST00000585428 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
SDF2-202ENST00000585428 K7ERS5 55 aa4.12□□□□□ -1.75
SDF2-202ENST00000585428 A6NED7 52 aa4.11□□□□□ -1.75
SDF2-202ENST00000585428 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
SDF2-202ENST00000585428 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
SDF2-202ENST00000585428 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
SDF2-202ENST00000585428 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
SDF2-202ENST00000585428 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SDF2-202ENST00000585428 ROMO1P60602 79 aa3.81□□□□□ -1.8
SDF2-202ENST00000585428 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SDF2-202ENST00000585428 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
SDF2-202ENST00000585428 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
SDF2-202ENST00000585428 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SDF2-202ENST00000585428 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
SDF2-202ENST00000585428 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
SDF2-202ENST00000585428 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
SDF2-202ENST00000585428 INE1O15225 51 aa2.58□□□□□ -2
SDF2-202ENST00000585428 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SDF2-202ENST00000585428 PRM1P04553 51 aa1.92□□□□□ -2.1
SDF2-202ENST00000585428 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms