RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 K7ERS5 55 aa2.5□□□□□ -2.01
MSI2-219ENST00000584476 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
MSI2-219ENST00000584476 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
MSI2-219ENST00000584476 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
MSI2-219ENST00000584476 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
MSI2-219ENST00000584476 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
MSI2-219ENST00000584476 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
MSI2-219ENST00000584476 MT1XP80297 61 aa2.43□□□□□ -2.02
MSI2-219ENST00000584476 ROMO1P60602 79 aa2.42□□□□□ -2.02
MSI2-219ENST00000584476 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
MSI2-219ENST00000584476 USH2AO75445 5202 aa2.37□□□□□ -2.03
MSI2-219ENST00000584476 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
MSI2-219ENST00000584476 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
MSI2-219ENST00000584476 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
MSI2-219ENST00000584476 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
MSI2-219ENST00000584476 TNP1P09430 55 aa2.33□□□□□ -2.04
MSI2-219ENST00000584476 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
MSI2-219ENST00000584476 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
MSI2-219ENST00000584476 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
MSI2-219ENST00000584476 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
MSI2-219ENST00000584476 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
MSI2-219ENST00000584476 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
MSI2-219ENST00000584476 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
MSI2-219ENST00000584476 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
MSI2-219ENST00000584476 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
MSI2-219ENST00000584476 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
MSI2-219ENST00000584476 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
MSI2-219ENST00000584476 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
MSI2-219ENST00000584476 MT1EP04732 61 aa2.13□□□□□ -2.07
MSI2-219ENST00000584476 KMT2DO14686 5537 aa2.13□□□□□ -2.07
MSI2-219ENST00000584476 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
MSI2-219ENST00000584476 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
MSI2-219ENST00000584476 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
MSI2-219ENST00000584476 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
MSI2-219ENST00000584476 MT1LQ93083 61 aa2.09□□□□□ -2.07
MSI2-219ENST00000584476 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
MSI2-219ENST00000584476 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
MSI2-219ENST00000584476 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.09
MSI2-219ENST00000584476 MT1GP13640 62 aa2.01□□□□□ -2.09
MSI2-219ENST00000584476 SPRR2EP22531 72 aa2.01□□□□□ -2.09
MSI2-219ENST00000584476 SPRR2BP35325 72 aa2.01□□□□□ -2.09
MSI2-219ENST00000584476 SPRR2AP35326 72 aa2.01□□□□□ -2.09
MSI2-219ENST00000584476 MT1MQ8N339 61 aa2.01□□□□□ -2.09
MSI2-219ENST00000584476 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
MSI2-219ENST00000584476 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
MSI2-219ENST00000584476 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
MSI2-219ENST00000584476 SPRR2DP22532 72 aa1.94□□□□□ -2.1
MSI2-219ENST00000584476 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
MSI2-219ENST00000584476 NEBP20929 6669 aa1.91□□□□□ -2.1
MSI2-219ENST00000584476 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
MSI2-219ENST00000584476 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
MSI2-219ENST00000584476 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
MSI2-219ENST00000584476 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
MSI2-219ENST00000584476 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
MSI2-219ENST00000584476 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
MSI2-219ENST00000584476 MT1AP04731 61 aa1.77□□□□□ -2.13
MSI2-219ENST00000584476 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
MSI2-219ENST00000584476 KRTAP2-1Q9BYU5 128 aa1.76□□□□□ -2.13
MSI2-219ENST00000584476 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
MSI2-219ENST00000584476 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
MSI2-219ENST00000584476 MT4P47944 62 aa1.69□□□□□ -2.14
MSI2-219ENST00000584476 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
MSI2-219ENST00000584476 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
MSI2-219ENST00000584476 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
MSI2-219ENST00000584476 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
MSI2-219ENST00000584476 INE1O15225 51 aa1.54□□□□□ -2.16
MSI2-219ENST00000584476 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
MSI2-219ENST00000584476 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
MSI2-219ENST00000584476 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
MSI2-219ENST00000584476 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
MSI2-219ENST00000584476 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
MSI2-219ENST00000584476 PRM1P04553 51 aa1.27□□□□□ -2.21
MSI2-219ENST00000584476 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
MSI2-219ENST00000584476 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
MSI2-219ENST00000584476 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
MSI2-219ENST00000584476 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
MSI2-219ENST00000584476 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
MSI2-219ENST00000584476 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms