RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
NDEL1-217ENST00000583683 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
NDEL1-217ENST00000583683 MT1EP04732 61 aa6.65□□□□□ -1.34
NDEL1-217ENST00000583683 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
NDEL1-217ENST00000583683 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
NDEL1-217ENST00000583683 MT1LQ93083 61 aa6.48□□□□□ -1.37
NDEL1-217ENST00000583683 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
NDEL1-217ENST00000583683 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
NDEL1-217ENST00000583683 SPRR2EP22531 72 aa6.41□□□□□ -1.38
NDEL1-217ENST00000583683 SPRR2BP35325 72 aa6.41□□□□□ -1.38
NDEL1-217ENST00000583683 SPRR2AP35326 72 aa6.41□□□□□ -1.38
NDEL1-217ENST00000583683 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
NDEL1-217ENST00000583683 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
NDEL1-217ENST00000583683 MT1GP13640 62 aa6.36□□□□□ -1.39
NDEL1-217ENST00000583683 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
NDEL1-217ENST00000583683 MT1MQ8N339 61 aa6.28□□□□□ -1.4
NDEL1-217ENST00000583683 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
NDEL1-217ENST00000583683 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
NDEL1-217ENST00000583683 NEBP20929 6669 aa6.19□□□□□ -1.42
NDEL1-217ENST00000583683 SPRR2DP22532 72 aa6.18□□□□□ -1.42
NDEL1-217ENST00000583683 INE1O15225 51 aa6.15□□□□□ -1.43
NDEL1-217ENST00000583683 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
NDEL1-217ENST00000583683 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
NDEL1-217ENST00000583683 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
NDEL1-217ENST00000583683 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
NDEL1-217ENST00000583683 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
NDEL1-217ENST00000583683 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
NDEL1-217ENST00000583683 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.47
NDEL1-217ENST00000583683 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.47
NDEL1-217ENST00000583683 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
NDEL1-217ENST00000583683 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
NDEL1-217ENST00000583683 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
NDEL1-217ENST00000583683 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
NDEL1-217ENST00000583683 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
NDEL1-217ENST00000583683 MT1AP04731 61 aa5.5□□□□□ -1.53
NDEL1-217ENST00000583683 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
NDEL1-217ENST00000583683 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.53
NDEL1-217ENST00000583683 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
NDEL1-217ENST00000583683 MT4P47944 62 aa5.38□□□□□ -1.55
NDEL1-217ENST00000583683 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
NDEL1-217ENST00000583683 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
NDEL1-217ENST00000583683 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
NDEL1-217ENST00000583683 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
NDEL1-217ENST00000583683 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.57
NDEL1-217ENST00000583683 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
NDEL1-217ENST00000583683 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
NDEL1-217ENST00000583683 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
NDEL1-217ENST00000583683 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
NDEL1-217ENST00000583683 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
NDEL1-217ENST00000583683 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
NDEL1-217ENST00000583683 MT3P25713 68 aa4.99□□□□□ -1.61
NDEL1-217ENST00000583683 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
NDEL1-217ENST00000583683 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
NDEL1-217ENST00000583683 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
NDEL1-217ENST00000583683 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
NDEL1-217ENST00000583683 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
NDEL1-217ENST00000583683 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
NDEL1-217ENST00000583683 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
NDEL1-217ENST00000583683 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
NDEL1-217ENST00000583683 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
NDEL1-217ENST00000583683 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
NDEL1-217ENST00000583683 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
NDEL1-217ENST00000583683 PRM1P04553 51 aa4.33□□□□□ -1.72
NDEL1-217ENST00000583683 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
NDEL1-217ENST00000583683 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
NDEL1-217ENST00000583683 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
NDEL1-217ENST00000583683 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
NDEL1-217ENST00000583683 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
NDEL1-217ENST00000583683 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
NDEL1-217ENST00000583683 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
NDEL1-217ENST00000583683 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
NDEL1-217ENST00000583683 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
NDEL1-217ENST00000583683 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
NDEL1-217ENST00000583683 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
NDEL1-217ENST00000583683 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
NDEL1-217ENST00000583683 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
NDEL1-217ENST00000583683 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
NDEL1-217ENST00000583683 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms