RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 Q5VV11 94 aa0.89□□□□□ -2.27
VAPA-206ENST00000583475 LINC00208Q96KT6 92 aa0.89□□□□□ -2.27
VAPA-206ENST00000583475 CYSTM1Q9H1C7 97 aa0.89□□□□□ -2.27
VAPA-206ENST00000583475 H7BZZ5 65 aa0.88□□□□□ -2.27
VAPA-206ENST00000583475 UQCR11O14957 56 aa0.88□□□□□ -2.27
VAPA-206ENST00000583475 ACYP2P14621 99 aa0.88□□□□□ -2.27
VAPA-206ENST00000583475 ACYP1P07311 99 aa0.87□□□□□ -2.27
VAPA-206ENST00000583475 WFDC13Q8IUB5 93 aa0.87□□□□□ -2.27
VAPA-206ENST00000583475 MRPL34Q9BQ48 92 aaKnown RBP0.87□□□□□ -2.27
VAPA-206ENST00000583475 FSIP2Q5CZC0 6907 aa0.87□□□□□ -2.27
VAPA-206ENST00000583475 SPINK7P58062 85 aa0.86□□□□□ -2.27
VAPA-206ENST00000583475 NREPQ16612 68 aa0.86□□□□□ -2.27
VAPA-206ENST00000583475 LINC00643Q86TS7 51 aa0.86□□□□□ -2.27
VAPA-206ENST00000583475 PRR15LQ9BU68 103 aa0.86□□□□□ -2.27
VAPA-206ENST00000583475 MT1BP07438 61 aa0.85□□□□□ -2.27
VAPA-206ENST00000583475 ATP5EP2Q5VTU8 51 aa0.85□□□□□ -2.27
VAPA-206ENST00000583475 LINC01558Q9Y6Z2 57 aa0.85□□□□□ -2.27
VAPA-206ENST00000583475 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
VAPA-206ENST00000583475 UBL5Q9BZL1 73 aa0.84□□□□□ -2.27
VAPA-206ENST00000583475 KMT2DO14686 5537 aa0.84□□□□□ -2.28
VAPA-206ENST00000583475 KRTAP19-8Q3LI54 63 aa0.83□□□□□ -2.28
VAPA-206ENST00000583475 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
VAPA-206ENST00000583475 COX6B2Q6YFQ2 88 aa0.83□□□□□ -2.28
VAPA-206ENST00000583475 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
VAPA-206ENST00000583475 NDUFB1O75438 58 aa0.82□□□□□ -2.28
VAPA-206ENST00000583475 KRTAP19-6Q3LI70 58 aa0.82□□□□□ -2.28
VAPA-206ENST00000583475 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
VAPA-206ENST00000583475 H0Y9P7 68 aa0.81□□□□□ -2.28
VAPA-206ENST00000583475 H1FX-AS1Q4G0G2 97 aa0.81□□□□□ -2.28
VAPA-206ENST00000583475 PLAC4Q8WY50 150 aa0.81□□□□□ -2.28
VAPA-206ENST00000583475 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
VAPA-206ENST00000583475 H0YAA0 97 aa0.8□□□□□ -2.28
VAPA-206ENST00000583475 MT1XP80297 61 aa0.8□□□□□ -2.28
VAPA-206ENST00000583475 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.28
VAPA-206ENST00000583475 S4R3F8 94 aa0.78□□□□□ -2.28
VAPA-206ENST00000583475 MDN1Q9NU22 5596 aa0.78□□□□□ -2.28
VAPA-206ENST00000583475 M0R2T5 61 aa0.77□□□□□ -2.29
VAPA-206ENST00000583475 A0A1B0GU69 56 aa0.76□□□□□ -2.29
VAPA-206ENST00000583475 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
VAPA-206ENST00000583475 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
VAPA-206ENST00000583475 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
VAPA-206ENST00000583475 CRIPTQ9P021 101 aa0.73□□□□□ -2.29
VAPA-206ENST00000583475 NEBP20929 6669 aa0.72□□□□□ -2.29
VAPA-206ENST00000583475 M0QZ58 72 aa0.71□□□□□ -2.3
VAPA-206ENST00000583475 MT1EP04732 61 aa0.7□□□□□ -2.3
VAPA-206ENST00000583475 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
VAPA-206ENST00000583475 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
VAPA-206ENST00000583475 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
VAPA-206ENST00000583475 MT1LQ93083 61 aa0.67□□□□□ -2.3
VAPA-206ENST00000583475 A0A0D9SG42 100 aa0.66□□□□□ -2.3
VAPA-206ENST00000583475 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
VAPA-206ENST00000583475 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
VAPA-206ENST00000583475 MT1MQ8N339 61 aa0.66□□□□□ -2.3
VAPA-206ENST00000583475 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
VAPA-206ENST00000583475 DSTQ03001 7570 aaKnown RBP0.65□□□□□ -2.31
VAPA-206ENST00000583475 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
VAPA-206ENST00000583475 SPRR2EP22531 72 aa0.64□□□□□ -2.31
VAPA-206ENST00000583475 SPRR2BP35325 72 aa0.64□□□□□ -2.31
VAPA-206ENST00000583475 SPRR2AP35326 72 aa0.64□□□□□ -2.31
VAPA-206ENST00000583475 MT1GP13640 62 aa0.62□□□□□ -2.31
VAPA-206ENST00000583475 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
VAPA-206ENST00000583475 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
VAPA-206ENST00000583475 SPRR2DP22532 72 aa0.61□□□□□ -2.31
VAPA-206ENST00000583475 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
VAPA-206ENST00000583475 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
VAPA-206ENST00000583475 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
VAPA-206ENST00000583475 TNP1P09430 55 aa0.58□□□□□ -2.32
VAPA-206ENST00000583475 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
VAPA-206ENST00000583475 KRTAP20-2Q3LI61 65 aa0.57□□□□□ -2.32
VAPA-206ENST00000583475 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
VAPA-206ENST00000583475 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
VAPA-206ENST00000583475 MT1AP04731 61 aa0.56□□□□□ -2.32
VAPA-206ENST00000583475 MT4P47944 62 aa0.54□□□□□ -2.32
VAPA-206ENST00000583475 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
VAPA-206ENST00000583475 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
VAPA-206ENST00000583475 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
VAPA-206ENST00000583475 PRM1P04553 51 aa0.35□□□□□ -2.35
VAPA-206ENST00000583475 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms