RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 SPRR2BP35325 72 aa4.9□□□□□ -1.63
ITGB4-209ENST00000583327 SPRR2AP35326 72 aa4.9□□□□□ -1.63
ITGB4-209ENST00000583327 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
ITGB4-209ENST00000583327 MT1LQ93083 61 aa4.89□□□□□ -1.63
ITGB4-209ENST00000583327 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
ITGB4-209ENST00000583327 MT1GP13640 62 aa4.85□□□□□ -1.63
ITGB4-209ENST00000583327 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
ITGB4-209ENST00000583327 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
ITGB4-209ENST00000583327 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
ITGB4-209ENST00000583327 NEBP20929 6669 aa4.81□□□□□ -1.64
ITGB4-209ENST00000583327 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
ITGB4-209ENST00000583327 MT1MQ8N339 61 aa4.75□□□□□ -1.65
ITGB4-209ENST00000583327 SPRR2DP22532 72 aa4.72□□□□□ -1.65
ITGB4-209ENST00000583327 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
ITGB4-209ENST00000583327 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
ITGB4-209ENST00000583327 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
ITGB4-209ENST00000583327 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
ITGB4-209ENST00000583327 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
ITGB4-209ENST00000583327 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
ITGB4-209ENST00000583327 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
ITGB4-209ENST00000583327 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
ITGB4-209ENST00000583327 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
ITGB4-209ENST00000583327 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
ITGB4-209ENST00000583327 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
ITGB4-209ENST00000583327 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
ITGB4-209ENST00000583327 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
ITGB4-209ENST00000583327 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
ITGB4-209ENST00000583327 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
ITGB4-209ENST00000583327 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
ITGB4-209ENST00000583327 MT1AP04731 61 aa4.16□□□□□ -1.74
ITGB4-209ENST00000583327 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
ITGB4-209ENST00000583327 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
ITGB4-209ENST00000583327 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
ITGB4-209ENST00000583327 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
ITGB4-209ENST00000583327 MT4P47944 62 aa4.09□□□□□ -1.75
ITGB4-209ENST00000583327 H3BS24 57 aa4.08□□□□□ -1.76
ITGB4-209ENST00000583327 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
ITGB4-209ENST00000583327 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
ITGB4-209ENST00000583327 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
ITGB4-209ENST00000583327 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
ITGB4-209ENST00000583327 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
ITGB4-209ENST00000583327 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
ITGB4-209ENST00000583327 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
ITGB4-209ENST00000583327 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
ITGB4-209ENST00000583327 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
ITGB4-209ENST00000583327 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
ITGB4-209ENST00000583327 MT3P25713 68 aa3.77□□□□□ -1.81
ITGB4-209ENST00000583327 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
ITGB4-209ENST00000583327 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
ITGB4-209ENST00000583327 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
ITGB4-209ENST00000583327 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
ITGB4-209ENST00000583327 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
ITGB4-209ENST00000583327 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
ITGB4-209ENST00000583327 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
ITGB4-209ENST00000583327 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
ITGB4-209ENST00000583327 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
ITGB4-209ENST00000583327 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
ITGB4-209ENST00000583327 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
ITGB4-209ENST00000583327 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
ITGB4-209ENST00000583327 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
ITGB4-209ENST00000583327 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
ITGB4-209ENST00000583327 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
ITGB4-209ENST00000583327 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
ITGB4-209ENST00000583327 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
ITGB4-209ENST00000583327 INE1O15225 51 aa3.06□□□□□ -1.92
ITGB4-209ENST00000583327 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
ITGB4-209ENST00000583327 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
ITGB4-209ENST00000583327 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
ITGB4-209ENST00000583327 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
ITGB4-209ENST00000583327 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
ITGB4-209ENST00000583327 PRM1P04553 51 aa2.73□□□□□ -1.97
ITGB4-209ENST00000583327 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
ITGB4-209ENST00000583327 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ITGB4-209ENST00000583327 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
ITGB4-209ENST00000583327 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
ITGB4-209ENST00000583327 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
ITGB4-209ENST00000583327 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
ITGB4-209ENST00000583327 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 69 ms