RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
TOP3A-214ENST00000582981 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
TOP3A-214ENST00000582981 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
TOP3A-214ENST00000582981 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
TOP3A-214ENST00000582981 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.83
TOP3A-214ENST00000582981 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
TOP3A-214ENST00000582981 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
TOP3A-214ENST00000582981 MT1LQ93083 61 aa3.55□□□□□ -1.84
TOP3A-214ENST00000582981 MT1EP04732 61 aa3.52□□□□□ -1.85
TOP3A-214ENST00000582981 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
TOP3A-214ENST00000582981 MT1GP13640 62 aa3.48□□□□□ -1.85
TOP3A-214ENST00000582981 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
TOP3A-214ENST00000582981 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
TOP3A-214ENST00000582981 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
TOP3A-214ENST00000582981 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
TOP3A-214ENST00000582981 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
TOP3A-214ENST00000582981 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
TOP3A-214ENST00000582981 MT1MQ8N339 61 aa3.31□□□□□ -1.88
TOP3A-214ENST00000582981 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
TOP3A-214ENST00000582981 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
TOP3A-214ENST00000582981 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
TOP3A-214ENST00000582981 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
TOP3A-214ENST00000582981 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
TOP3A-214ENST00000582981 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
TOP3A-214ENST00000582981 PRM1P04553 51 aa3.14□□□□□ -1.91
TOP3A-214ENST00000582981 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
TOP3A-214ENST00000582981 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
TOP3A-214ENST00000582981 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.92
TOP3A-214ENST00000582981 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
TOP3A-214ENST00000582981 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
TOP3A-214ENST00000582981 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TOP3A-214ENST00000582981 SPRR2EP22531 72 aa3.02□□□□□ -1.93
TOP3A-214ENST00000582981 SPRR2BP35325 72 aa3.02□□□□□ -1.93
TOP3A-214ENST00000582981 SPRR2AP35326 72 aa3.02□□□□□ -1.93
TOP3A-214ENST00000582981 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
TOP3A-214ENST00000582981 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
TOP3A-214ENST00000582981 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
TOP3A-214ENST00000582981 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
TOP3A-214ENST00000582981 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
TOP3A-214ENST00000582981 MT1AP04731 61 aa2.92□□□□□ -1.94
TOP3A-214ENST00000582981 SPRR2DP22532 72 aa2.89□□□□□ -1.95
TOP3A-214ENST00000582981 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TOP3A-214ENST00000582981 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
TOP3A-214ENST00000582981 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
TOP3A-214ENST00000582981 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
TOP3A-214ENST00000582981 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
TOP3A-214ENST00000582981 NEBP20929 6669 aa2.71□□□□□ -1.98
TOP3A-214ENST00000582981 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
TOP3A-214ENST00000582981 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
TOP3A-214ENST00000582981 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
TOP3A-214ENST00000582981 MT4P47944 62 aa2.62□□□□□ -1.99
TOP3A-214ENST00000582981 MT3P25713 68 aa2.61□□□□□ -1.99
TOP3A-214ENST00000582981 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
TOP3A-214ENST00000582981 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
TOP3A-214ENST00000582981 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
TOP3A-214ENST00000582981 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
TOP3A-214ENST00000582981 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TOP3A-214ENST00000582981 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
TOP3A-214ENST00000582981 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
TOP3A-214ENST00000582981 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
TOP3A-214ENST00000582981 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TOP3A-214ENST00000582981 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
TOP3A-214ENST00000582981 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
TOP3A-214ENST00000582981 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
TOP3A-214ENST00000582981 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
TOP3A-214ENST00000582981 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
TOP3A-214ENST00000582981 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TOP3A-214ENST00000582981 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
TOP3A-214ENST00000582981 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
TOP3A-214ENST00000582981 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
TOP3A-214ENST00000582981 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
TOP3A-214ENST00000582981 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
TOP3A-214ENST00000582981 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
TOP3A-214ENST00000582981 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
TOP3A-214ENST00000582981 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
TOP3A-214ENST00000582981 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
TOP3A-214ENST00000582981 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
TOP3A-214ENST00000582981 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 317.6 ms