RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.55
CSNK1D-220ENST00000581737 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CSNK1D-220ENST00000581737 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
CSNK1D-220ENST00000581737 SPRR2DP22532 72 aa5.34□□□□□ -1.55
CSNK1D-220ENST00000581737 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
CSNK1D-220ENST00000581737 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
CSNK1D-220ENST00000581737 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
CSNK1D-220ENST00000581737 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
CSNK1D-220ENST00000581737 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
CSNK1D-220ENST00000581737 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
CSNK1D-220ENST00000581737 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
CSNK1D-220ENST00000581737 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
CSNK1D-220ENST00000581737 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
CSNK1D-220ENST00000581737 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
CSNK1D-220ENST00000581737 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
CSNK1D-220ENST00000581737 MT1EP04732 61 aa4.96□□□□□ -1.62
CSNK1D-220ENST00000581737 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
CSNK1D-220ENST00000581737 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
CSNK1D-220ENST00000581737 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
CSNK1D-220ENST00000581737 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
CSNK1D-220ENST00000581737 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
CSNK1D-220ENST00000581737 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
CSNK1D-220ENST00000581737 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
CSNK1D-220ENST00000581737 MT1GP13640 62 aa4.8□□□□□ -1.64
CSNK1D-220ENST00000581737 MT1LQ93083 61 aa4.8□□□□□ -1.64
CSNK1D-220ENST00000581737 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
CSNK1D-220ENST00000581737 MT4P47944 62 aa4.75□□□□□ -1.65
CSNK1D-220ENST00000581737 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
CSNK1D-220ENST00000581737 MT1MQ8N339 61 aa4.71□□□□□ -1.66
CSNK1D-220ENST00000581737 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
CSNK1D-220ENST00000581737 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
CSNK1D-220ENST00000581737 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
CSNK1D-220ENST00000581737 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
CSNK1D-220ENST00000581737 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
CSNK1D-220ENST00000581737 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
CSNK1D-220ENST00000581737 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CSNK1D-220ENST00000581737 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
CSNK1D-220ENST00000581737 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
CSNK1D-220ENST00000581737 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
CSNK1D-220ENST00000581737 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
CSNK1D-220ENST00000581737 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
CSNK1D-220ENST00000581737 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
CSNK1D-220ENST00000581737 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
CSNK1D-220ENST00000581737 H3BS24 57 aa4.25□□□□□ -1.73
CSNK1D-220ENST00000581737 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
CSNK1D-220ENST00000581737 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
CSNK1D-220ENST00000581737 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
CSNK1D-220ENST00000581737 MT1AP04731 61 aa4.1□□□□□ -1.75
CSNK1D-220ENST00000581737 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
CSNK1D-220ENST00000581737 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
CSNK1D-220ENST00000581737 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CSNK1D-220ENST00000581737 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
CSNK1D-220ENST00000581737 INE1O15225 51 aa3.99□□□□□ -1.77
CSNK1D-220ENST00000581737 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
CSNK1D-220ENST00000581737 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
CSNK1D-220ENST00000581737 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
CSNK1D-220ENST00000581737 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
CSNK1D-220ENST00000581737 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
CSNK1D-220ENST00000581737 MT3P25713 68 aa3.75□□□□□ -1.81
CSNK1D-220ENST00000581737 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
CSNK1D-220ENST00000581737 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
CSNK1D-220ENST00000581737 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
CSNK1D-220ENST00000581737 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CSNK1D-220ENST00000581737 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CSNK1D-220ENST00000581737 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
CSNK1D-220ENST00000581737 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
CSNK1D-220ENST00000581737 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
CSNK1D-220ENST00000581737 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CSNK1D-220ENST00000581737 PRM1P04553 51 aa3.03□□□□□ -1.92
CSNK1D-220ENST00000581737 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CSNK1D-220ENST00000581737 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
CSNK1D-220ENST00000581737 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CSNK1D-220ENST00000581737 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CSNK1D-220ENST00000581737 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CSNK1D-220ENST00000581737 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CSNK1D-220ENST00000581737 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CSNK1D-220ENST00000581737 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CSNK1D-220ENST00000581737 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 166.7 ms