RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 A6NED7 52 aa4.54□□□□□ -1.68
TOP3A-210ENST00000580713 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
TOP3A-210ENST00000580713 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
TOP3A-210ENST00000580713 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
TOP3A-210ENST00000580713 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
TOP3A-210ENST00000580713 A0A0D9SG42 100 aa4.49□□□□□ -1.69
TOP3A-210ENST00000580713 A8MU10 97 aa4.47□□□□□ -1.69
TOP3A-210ENST00000580713 MT1XP80297 61 aa4.46□□□□□ -1.7
TOP3A-210ENST00000580713 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
TOP3A-210ENST00000580713 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
TOP3A-210ENST00000580713 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
TOP3A-210ENST00000580713 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
TOP3A-210ENST00000580713 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
TOP3A-210ENST00000580713 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
TOP3A-210ENST00000580713 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
TOP3A-210ENST00000580713 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
TOP3A-210ENST00000580713 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
TOP3A-210ENST00000580713 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
TOP3A-210ENST00000580713 K7ERS5 55 aa4.36□□□□□ -1.71
TOP3A-210ENST00000580713 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
TOP3A-210ENST00000580713 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
TOP3A-210ENST00000580713 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
TOP3A-210ENST00000580713 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
TOP3A-210ENST00000580713 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
TOP3A-210ENST00000580713 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
TOP3A-210ENST00000580713 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TOP3A-210ENST00000580713 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
TOP3A-210ENST00000580713 MT4P47944 62 aa4.15□□□□□ -1.75
TOP3A-210ENST00000580713 ROMO1P60602 79 aa4.14□□□□□ -1.75
TOP3A-210ENST00000580713 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
TOP3A-210ENST00000580713 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TOP3A-210ENST00000580713 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
TOP3A-210ENST00000580713 TNP1P09430 55 aa4.08□□□□□ -1.76
TOP3A-210ENST00000580713 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
TOP3A-210ENST00000580713 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
TOP3A-210ENST00000580713 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
TOP3A-210ENST00000580713 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
TOP3A-210ENST00000580713 MT1EP04732 61 aa3.98□□□□□ -1.77
TOP3A-210ENST00000580713 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
TOP3A-210ENST00000580713 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
TOP3A-210ENST00000580713 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
TOP3A-210ENST00000580713 MT1GP13640 62 aa3.9□□□□□ -1.79
TOP3A-210ENST00000580713 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
TOP3A-210ENST00000580713 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
TOP3A-210ENST00000580713 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TOP3A-210ENST00000580713 MT1MQ8N339 61 aa3.83□□□□□ -1.8
TOP3A-210ENST00000580713 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
TOP3A-210ENST00000580713 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
TOP3A-210ENST00000580713 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
TOP3A-210ENST00000580713 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
TOP3A-210ENST00000580713 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
TOP3A-210ENST00000580713 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
TOP3A-210ENST00000580713 MT1LQ93083 61 aa3.73□□□□□ -1.81
TOP3A-210ENST00000580713 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
TOP3A-210ENST00000580713 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
TOP3A-210ENST00000580713 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
TOP3A-210ENST00000580713 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
TOP3A-210ENST00000580713 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
TOP3A-210ENST00000580713 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
TOP3A-210ENST00000580713 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
TOP3A-210ENST00000580713 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
TOP3A-210ENST00000580713 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
TOP3A-210ENST00000580713 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
TOP3A-210ENST00000580713 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TOP3A-210ENST00000580713 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
TOP3A-210ENST00000580713 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TOP3A-210ENST00000580713 MT1AP04731 61 aa3.17□□□□□ -1.9
TOP3A-210ENST00000580713 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
TOP3A-210ENST00000580713 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
TOP3A-210ENST00000580713 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
TOP3A-210ENST00000580713 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
TOP3A-210ENST00000580713 INE1O15225 51 aa2.5□□□□□ -2.01
TOP3A-210ENST00000580713 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
TOP3A-210ENST00000580713 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TOP3A-210ENST00000580713 PRM1P04553 51 aa2.14□□□□□ -2.07
TOP3A-210ENST00000580713 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
TOP3A-210ENST00000580713 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TOP3A-210ENST00000580713 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 91 ms