RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
SKA2-203ENST00000578105 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SKA2-203ENST00000578105 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
SKA2-203ENST00000578105 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
SKA2-203ENST00000578105 MT1BP07438 61 aa3.4□□□□□ -1.87
SKA2-203ENST00000578105 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
SKA2-203ENST00000578105 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
SKA2-203ENST00000578105 MT1XP80297 61 aa3.34□□□□□ -1.87
SKA2-203ENST00000578105 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
SKA2-203ENST00000578105 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
SKA2-203ENST00000578105 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
SKA2-203ENST00000578105 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SKA2-203ENST00000578105 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
SKA2-203ENST00000578105 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
SKA2-203ENST00000578105 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SKA2-203ENST00000578105 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
SKA2-203ENST00000578105 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
SKA2-203ENST00000578105 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
SKA2-203ENST00000578105 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
SKA2-203ENST00000578105 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
SKA2-203ENST00000578105 USH2AO75445 5202 aa3□□□□□ -1.93
SKA2-203ENST00000578105 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
SKA2-203ENST00000578105 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SKA2-203ENST00000578105 MT1EP04732 61 aa2.93□□□□□ -1.94
SKA2-203ENST00000578105 MT1LQ93083 61 aa2.9□□□□□ -1.95
SKA2-203ENST00000578105 INE1O15225 51 aa2.87□□□□□ -1.95
SKA2-203ENST00000578105 MT1GP13640 62 aa2.83□□□□□ -1.96
SKA2-203ENST00000578105 MT3P25713 68 aa2.82□□□□□ -1.96
SKA2-203ENST00000578105 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
SKA2-203ENST00000578105 KMT2DO14686 5537 aa2.76□□□□□ -1.97
SKA2-203ENST00000578105 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
SKA2-203ENST00000578105 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
SKA2-203ENST00000578105 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
SKA2-203ENST00000578105 MT1MQ8N339 61 aa2.74□□□□□ -1.97
SKA2-203ENST00000578105 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
SKA2-203ENST00000578105 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
SKA2-203ENST00000578105 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
SKA2-203ENST00000578105 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
SKA2-203ENST00000578105 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SKA2-203ENST00000578105 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SKA2-203ENST00000578105 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
SKA2-203ENST00000578105 LCE1FQ5T754 118 aa2.53□□□□□ -2
SKA2-203ENST00000578105 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
SKA2-203ENST00000578105 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
SKA2-203ENST00000578105 MT1AP04731 61 aa2.5□□□□□ -2.01
SKA2-203ENST00000578105 SPRR2EP22531 72 aa2.5□□□□□ -2.01
SKA2-203ENST00000578105 SPRR2BP35325 72 aa2.5□□□□□ -2.01
SKA2-203ENST00000578105 SPRR2AP35326 72 aa2.5□□□□□ -2.01
SKA2-203ENST00000578105 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
SKA2-203ENST00000578105 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
SKA2-203ENST00000578105 SPRR2DP22532 72 aa2.42□□□□□ -2.02
SKA2-203ENST00000578105 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
SKA2-203ENST00000578105 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
SKA2-203ENST00000578105 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
SKA2-203ENST00000578105 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SKA2-203ENST00000578105 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
SKA2-203ENST00000578105 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SKA2-203ENST00000578105 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
SKA2-203ENST00000578105 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
SKA2-203ENST00000578105 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
SKA2-203ENST00000578105 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
SKA2-203ENST00000578105 NEBP20929 6669 aa2.14□□□□□ -2.07
SKA2-203ENST00000578105 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
SKA2-203ENST00000578105 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
SKA2-203ENST00000578105 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
SKA2-203ENST00000578105 PRM1P04553 51 aa2.03□□□□□ -2.08
SKA2-203ENST00000578105 MT4P47944 62 aa2.03□□□□□ -2.08
SKA2-203ENST00000578105 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SKA2-203ENST00000578105 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
SKA2-203ENST00000578105 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
SKA2-203ENST00000578105 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
SKA2-203ENST00000578105 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
SKA2-203ENST00000578105 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
SKA2-203ENST00000578105 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SKA2-203ENST00000578105 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
SKA2-203ENST00000578105 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
SKA2-203ENST00000578105 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 226.6 ms