RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
LIMD2-202ENST00000578061 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.26
LIMD2-202ENST00000578061 PSPHP1O15172 72 aa7.16□□□□□ -1.26
LIMD2-202ENST00000578061 KRTAP12-3P60328 96 aa7.15□□□□□ -1.26
LIMD2-202ENST00000578061 V9GYY9 64 aa7.09□□□□□ -1.27
LIMD2-202ENST00000578061 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
LIMD2-202ENST00000578061 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
LIMD2-202ENST00000578061 K7ERS5 55 aa7.06□□□□□ -1.28
LIMD2-202ENST00000578061 Q1T7F1 81 aa7.06□□□□□ -1.28
LIMD2-202ENST00000578061 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
LIMD2-202ENST00000578061 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
LIMD2-202ENST00000578061 MT4P47944 62 aa7.04□□□□□ -1.28
LIMD2-202ENST00000578061 HMCN1Q96RW7 5635 aa7.02□□□□□ -1.29
LIMD2-202ENST00000578061 KRTAP5-4Q6L8H1 288 aa6.93□□□□□ -1.3
LIMD2-202ENST00000578061 A6NED7 52 aa6.88□□□□□ -1.31
LIMD2-202ENST00000578061 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
LIMD2-202ENST00000578061 AHNAK2Q8IVF2 5795 aa6.75□□□□□ -1.33
LIMD2-202ENST00000578061 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
LIMD2-202ENST00000578061 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
LIMD2-202ENST00000578061 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
LIMD2-202ENST00000578061 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
LIMD2-202ENST00000578061 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
LIMD2-202ENST00000578061 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
LIMD2-202ENST00000578061 PCP4P48539 62 aa6.65□□□□□ -1.34
LIMD2-202ENST00000578061 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
LIMD2-202ENST00000578061 ROMO1P60602 79 aa6.61□□□□□ -1.35
LIMD2-202ENST00000578061 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
LIMD2-202ENST00000578061 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
LIMD2-202ENST00000578061 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
LIMD2-202ENST00000578061 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
LIMD2-202ENST00000578061 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
LIMD2-202ENST00000578061 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
LIMD2-202ENST00000578061 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
LIMD2-202ENST00000578061 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
LIMD2-202ENST00000578061 MT1AP04731 61 aa6.26□□□□□ -1.41
LIMD2-202ENST00000578061 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
LIMD2-202ENST00000578061 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
LIMD2-202ENST00000578061 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
LIMD2-202ENST00000578061 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
LIMD2-202ENST00000578061 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
LIMD2-202ENST00000578061 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
LIMD2-202ENST00000578061 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
LIMD2-202ENST00000578061 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
LIMD2-202ENST00000578061 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
LIMD2-202ENST00000578061 MT3P25713 68 aa5.71□□□□□ -1.5
LIMD2-202ENST00000578061 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
LIMD2-202ENST00000578061 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
LIMD2-202ENST00000578061 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
LIMD2-202ENST00000578061 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
LIMD2-202ENST00000578061 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
LIMD2-202ENST00000578061 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
LIMD2-202ENST00000578061 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
LIMD2-202ENST00000578061 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
LIMD2-202ENST00000578061 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
LIMD2-202ENST00000578061 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
LIMD2-202ENST00000578061 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
LIMD2-202ENST00000578061 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
LIMD2-202ENST00000578061 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
LIMD2-202ENST00000578061 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
LIMD2-202ENST00000578061 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
LIMD2-202ENST00000578061 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
LIMD2-202ENST00000578061 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
LIMD2-202ENST00000578061 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
LIMD2-202ENST00000578061 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
LIMD2-202ENST00000578061 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
LIMD2-202ENST00000578061 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
LIMD2-202ENST00000578061 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
LIMD2-202ENST00000578061 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
LIMD2-202ENST00000578061 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
LIMD2-202ENST00000578061 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
LIMD2-202ENST00000578061 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
LIMD2-202ENST00000578061 PRM1P04553 51 aa3.41□□□□□ -1.86
LIMD2-202ENST00000578061 H3BS24 57 aa3.34□□□□□ -1.87
LIMD2-202ENST00000578061 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
LIMD2-202ENST00000578061 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
LIMD2-202ENST00000578061 INE1O15225 51 aa2.81□□□□□ -1.96
LIMD2-202ENST00000578061 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 69.3 ms