RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
CTDNEP1-212ENST00000576613 A0A1B0GU33 70 aa3.92□□□□□ -1.78
CTDNEP1-212ENST00000576613 TNP1P09430 55 aa3.89□□□□□ -1.79
CTDNEP1-212ENST00000576613 COA5Q86WW8 74 aa3.88□□□□□ -1.79
CTDNEP1-212ENST00000576613 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CTDNEP1-212ENST00000576613 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
CTDNEP1-212ENST00000576613 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
CTDNEP1-212ENST00000576613 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
CTDNEP1-212ENST00000576613 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
CTDNEP1-212ENST00000576613 COX7CP15954 63 aa3.78□□□□□ -1.8
CTDNEP1-212ENST00000576613 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
CTDNEP1-212ENST00000576613 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
CTDNEP1-212ENST00000576613 A8MU10 97 aa3.76□□□□□ -1.81
CTDNEP1-212ENST00000576613 A0A1B0GU69 56 aa3.72□□□□□ -1.81
CTDNEP1-212ENST00000576613 TMEM258P61165 79 aa3.7□□□□□ -1.82
CTDNEP1-212ENST00000576613 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
CTDNEP1-212ENST00000576613 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
CTDNEP1-212ENST00000576613 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CTDNEP1-212ENST00000576613 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
CTDNEP1-212ENST00000576613 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
CTDNEP1-212ENST00000576613 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
CTDNEP1-212ENST00000576613 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
CTDNEP1-212ENST00000576613 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CTDNEP1-212ENST00000576613 V9GYY9 64 aa3.58□□□□□ -1.84
CTDNEP1-212ENST00000576613 H7BZZ5 65 aa3.57□□□□□ -1.84
CTDNEP1-212ENST00000576613 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CTDNEP1-212ENST00000576613 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
CTDNEP1-212ENST00000576613 PRR15LQ9BU68 103 aa3.54□□□□□ -1.84
CTDNEP1-212ENST00000576613 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CTDNEP1-212ENST00000576613 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
CTDNEP1-212ENST00000576613 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CTDNEP1-212ENST00000576613 MT1AP04731 61 aa3.49□□□□□ -1.85
CTDNEP1-212ENST00000576613 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
CTDNEP1-212ENST00000576613 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
CTDNEP1-212ENST00000576613 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
CTDNEP1-212ENST00000576613 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
CTDNEP1-212ENST00000576613 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CTDNEP1-212ENST00000576613 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CTDNEP1-212ENST00000576613 UQCR11O14957 56 aa3.4□□□□□ -1.87
CTDNEP1-212ENST00000576613 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
CTDNEP1-212ENST00000576613 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
CTDNEP1-212ENST00000576613 Q1T7F1 81 aa3.39□□□□□ -1.87
CTDNEP1-212ENST00000576613 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
CTDNEP1-212ENST00000576613 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
CTDNEP1-212ENST00000576613 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
CTDNEP1-212ENST00000576613 K7ERS5 55 aa3.32□□□□□ -1.88
CTDNEP1-212ENST00000576613 PSPHP1O15172 72 aa3.3□□□□□ -1.88
CTDNEP1-212ENST00000576613 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
CTDNEP1-212ENST00000576613 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
CTDNEP1-212ENST00000576613 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
CTDNEP1-212ENST00000576613 A6NED7 52 aa3.25□□□□□ -1.89
CTDNEP1-212ENST00000576613 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
CTDNEP1-212ENST00000576613 H3BS24 57 aa3.24□□□□□ -1.89
CTDNEP1-212ENST00000576613 MT3P25713 68 aa3.22□□□□□ -1.89
CTDNEP1-212ENST00000576613 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
CTDNEP1-212ENST00000576613 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
CTDNEP1-212ENST00000576613 ROMO1P60602 79 aa2.99□□□□□ -1.93
CTDNEP1-212ENST00000576613 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
CTDNEP1-212ENST00000576613 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CTDNEP1-212ENST00000576613 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
CTDNEP1-212ENST00000576613 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
CTDNEP1-212ENST00000576613 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
CTDNEP1-212ENST00000576613 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CTDNEP1-212ENST00000576613 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CTDNEP1-212ENST00000576613 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
CTDNEP1-212ENST00000576613 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CTDNEP1-212ENST00000576613 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
CTDNEP1-212ENST00000576613 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CTDNEP1-212ENST00000576613 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CTDNEP1-212ENST00000576613 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
CTDNEP1-212ENST00000576613 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CTDNEP1-212ENST00000576613 INE1O15225 51 aa2.24□□□□□ -2.05
CTDNEP1-212ENST00000576613 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
CTDNEP1-212ENST00000576613 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
CTDNEP1-212ENST00000576613 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CTDNEP1-212ENST00000576613 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CTDNEP1-212ENST00000576613 PRM1P04553 51 aa1.5□□□□□ -2.17
CTDNEP1-212ENST00000576613 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 170.9 ms