RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 SPRR2DP22532 72 aa4.68□□□□□ -1.66
LITAF-219ENST00000576334 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
LITAF-219ENST00000576334 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
LITAF-219ENST00000576334 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
LITAF-219ENST00000576334 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
LITAF-219ENST00000576334 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
LITAF-219ENST00000576334 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
LITAF-219ENST00000576334 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
LITAF-219ENST00000576334 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
LITAF-219ENST00000576334 A0A0D9SG42 100 aa4.53□□□□□ -1.68
LITAF-219ENST00000576334 K7ERS5 55 aa4.51□□□□□ -1.69
LITAF-219ENST00000576334 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
LITAF-219ENST00000576334 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
LITAF-219ENST00000576334 ROMO1P60602 79 aa4.46□□□□□ -1.7
LITAF-219ENST00000576334 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
LITAF-219ENST00000576334 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
LITAF-219ENST00000576334 MT1EP04732 61 aa4.44□□□□□ -1.7
LITAF-219ENST00000576334 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
LITAF-219ENST00000576334 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
LITAF-219ENST00000576334 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
LITAF-219ENST00000576334 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
LITAF-219ENST00000576334 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
LITAF-219ENST00000576334 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
LITAF-219ENST00000576334 MT1GP13640 62 aa4.25□□□□□ -1.73
LITAF-219ENST00000576334 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
LITAF-219ENST00000576334 MT1LQ93083 61 aa4.24□□□□□ -1.73
LITAF-219ENST00000576334 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
LITAF-219ENST00000576334 MT1MQ8N339 61 aa4.23□□□□□ -1.73
LITAF-219ENST00000576334 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
LITAF-219ENST00000576334 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
LITAF-219ENST00000576334 TNP1P09430 55 aa4.16□□□□□ -1.74
LITAF-219ENST00000576334 MT4P47944 62 aa4.14□□□□□ -1.75
LITAF-219ENST00000576334 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
LITAF-219ENST00000576334 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
LITAF-219ENST00000576334 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
LITAF-219ENST00000576334 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
LITAF-219ENST00000576334 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
LITAF-219ENST00000576334 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
LITAF-219ENST00000576334 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
LITAF-219ENST00000576334 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
LITAF-219ENST00000576334 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
LITAF-219ENST00000576334 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
LITAF-219ENST00000576334 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
LITAF-219ENST00000576334 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
LITAF-219ENST00000576334 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
LITAF-219ENST00000576334 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
LITAF-219ENST00000576334 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
LITAF-219ENST00000576334 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
LITAF-219ENST00000576334 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
LITAF-219ENST00000576334 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
LITAF-219ENST00000576334 MT1AP04731 61 aa3.58□□□□□ -1.84
LITAF-219ENST00000576334 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
LITAF-219ENST00000576334 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
LITAF-219ENST00000576334 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
LITAF-219ENST00000576334 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
LITAF-219ENST00000576334 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
LITAF-219ENST00000576334 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
LITAF-219ENST00000576334 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
LITAF-219ENST00000576334 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
LITAF-219ENST00000576334 MT3P25713 68 aa3.25□□□□□ -1.89
LITAF-219ENST00000576334 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
LITAF-219ENST00000576334 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
LITAF-219ENST00000576334 INE1O15225 51 aa3.05□□□□□ -1.92
LITAF-219ENST00000576334 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
LITAF-219ENST00000576334 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
LITAF-219ENST00000576334 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
LITAF-219ENST00000576334 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
LITAF-219ENST00000576334 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
LITAF-219ENST00000576334 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
LITAF-219ENST00000576334 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
LITAF-219ENST00000576334 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
LITAF-219ENST00000576334 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
LITAF-219ENST00000576334 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
LITAF-219ENST00000576334 PRM1P04553 51 aa2.34□□□□□ -2.03
LITAF-219ENST00000576334 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
LITAF-219ENST00000576334 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
LITAF-219ENST00000576334 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
LITAF-219ENST00000576334 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 367.9 ms