RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
CDC27-217ENST00000575483 MT1MQ8N339 61 aa4.98□□□□□ -1.61
CDC27-217ENST00000575483 MT4P47944 62 aa4.97□□□□□ -1.61
CDC27-217ENST00000575483 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
CDC27-217ENST00000575483 MT1LQ93083 61 aa4.95□□□□□ -1.62
CDC27-217ENST00000575483 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
CDC27-217ENST00000575483 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
CDC27-217ENST00000575483 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
CDC27-217ENST00000575483 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
CDC27-217ENST00000575483 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
CDC27-217ENST00000575483 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
CDC27-217ENST00000575483 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CDC27-217ENST00000575483 COA5Q86WW8 74 aa4.86□□□□□ -1.63
CDC27-217ENST00000575483 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
CDC27-217ENST00000575483 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
CDC27-217ENST00000575483 A0A1B0GU33 70 aa4.8□□□□□ -1.64
CDC27-217ENST00000575483 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
CDC27-217ENST00000575483 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
CDC27-217ENST00000575483 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
CDC27-217ENST00000575483 K7ERU9 68 aa4.78□□□□□ -1.64
CDC27-217ENST00000575483 SEC61GP60059 68 aa4.78□□□□□ -1.64
CDC27-217ENST00000575483 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
CDC27-217ENST00000575483 A8MU10 97 aa4.68□□□□□ -1.66
CDC27-217ENST00000575483 TNP1P09430 55 aa4.66□□□□□ -1.66
CDC27-217ENST00000575483 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
CDC27-217ENST00000575483 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
CDC27-217ENST00000575483 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
CDC27-217ENST00000575483 H7BZZ5 65 aa4.62□□□□□ -1.67
CDC27-217ENST00000575483 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
CDC27-217ENST00000575483 A0A1B0GU69 56 aa4.58□□□□□ -1.68
CDC27-217ENST00000575483 COX7CP15954 63 aa4.58□□□□□ -1.68
CDC27-217ENST00000575483 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
CDC27-217ENST00000575483 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
CDC27-217ENST00000575483 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
CDC27-217ENST00000575483 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
CDC27-217ENST00000575483 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
CDC27-217ENST00000575483 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
CDC27-217ENST00000575483 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
CDC27-217ENST00000575483 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CDC27-217ENST00000575483 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
CDC27-217ENST00000575483 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
CDC27-217ENST00000575483 ANAPC13Q9BS18 74 aa4.23□□□□□ -1.73
CDC27-217ENST00000575483 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
CDC27-217ENST00000575483 UQCR11O14957 56 aa4.21□□□□□ -1.74
CDC27-217ENST00000575483 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
CDC27-217ENST00000575483 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
CDC27-217ENST00000575483 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
CDC27-217ENST00000575483 MT1AP04731 61 aa4.19□□□□□ -1.74
CDC27-217ENST00000575483 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
CDC27-217ENST00000575483 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
CDC27-217ENST00000575483 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
CDC27-217ENST00000575483 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CDC27-217ENST00000575483 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
CDC27-217ENST00000575483 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
CDC27-217ENST00000575483 K7ERS5 55 aa4□□□□□ -1.77
CDC27-217ENST00000575483 TMEM258P61165 79 aa4□□□□□ -1.77
CDC27-217ENST00000575483 PSPHP1O15172 72 aa3.88□□□□□ -1.79
CDC27-217ENST00000575483 Q1T7F1 81 aa3.83□□□□□ -1.8
CDC27-217ENST00000575483 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
CDC27-217ENST00000575483 V9GYY9 64 aa3.8□□□□□ -1.8
CDC27-217ENST00000575483 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
CDC27-217ENST00000575483 ROMO1P60602 79 aa3.75□□□□□ -1.81
CDC27-217ENST00000575483 A6NED7 52 aa3.7□□□□□ -1.82
CDC27-217ENST00000575483 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
CDC27-217ENST00000575483 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CDC27-217ENST00000575483 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CDC27-217ENST00000575483 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
CDC27-217ENST00000575483 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
CDC27-217ENST00000575483 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
CDC27-217ENST00000575483 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CDC27-217ENST00000575483 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
CDC27-217ENST00000575483 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
CDC27-217ENST00000575483 KTN1-AS1Q86SY8 53 aa2.17□□□□□ -2.06
CDC27-217ENST00000575483 PRO0628Q9UI54 55 aa2.16□□□□□ -2.06
CDC27-217ENST00000575483 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
CDC27-217ENST00000575483 PRM1P04553 51 aa1.91□□□□□ -2.1
CDC27-217ENST00000575483 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
CDC27-217ENST00000575483 INE1O15225 51 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 147.2 ms