RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 K7ERS5 55 aa7.48□□□□□ -1.21
HCFC1R1-208ENST00000575214 MT1GP13640 62 aa7.43□□□□□ -1.22
HCFC1R1-208ENST00000575214 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
HCFC1R1-208ENST00000575214 MT1LQ93083 61 aa7.39□□□□□ -1.23
HCFC1R1-208ENST00000575214 A6NED7 52 aa7.37□□□□□ -1.23
HCFC1R1-208ENST00000575214 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
HCFC1R1-208ENST00000575214 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
HCFC1R1-208ENST00000575214 MT1MQ8N339 61 aa7.32□□□□□ -1.24
HCFC1R1-208ENST00000575214 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
HCFC1R1-208ENST00000575214 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
HCFC1R1-208ENST00000575214 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
HCFC1R1-208ENST00000575214 CDC42SE1Q9NRR8 79 aa7.1□□□□□ -1.27
HCFC1R1-208ENST00000575214 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
HCFC1R1-208ENST00000575214 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
HCFC1R1-208ENST00000575214 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
HCFC1R1-208ENST00000575214 ROMO1P60602 79 aa6.98□□□□□ -1.29
HCFC1R1-208ENST00000575214 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
HCFC1R1-208ENST00000575214 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
HCFC1R1-208ENST00000575214 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
HCFC1R1-208ENST00000575214 BRK1Q8WUW1 75 aa6.9□□□□□ -1.31
HCFC1R1-208ENST00000575214 MT4P47944 62 aa6.87□□□□□ -1.31
HCFC1R1-208ENST00000575214 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
HCFC1R1-208ENST00000575214 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
HCFC1R1-208ENST00000575214 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
HCFC1R1-208ENST00000575214 HMCN1Q96RW7 5635 aa6.83□□□□□ -1.32
HCFC1R1-208ENST00000575214 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
HCFC1R1-208ENST00000575214 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
HCFC1R1-208ENST00000575214 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
HCFC1R1-208ENST00000575214 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
HCFC1R1-208ENST00000575214 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
HCFC1R1-208ENST00000575214 PMAIP1Q13794 54 aa6.54□□□□□ -1.36
HCFC1R1-208ENST00000575214 AHNAK2Q8IVF2 5795 aa6.51□□□□□ -1.37
HCFC1R1-208ENST00000575214 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
HCFC1R1-208ENST00000575214 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.37
HCFC1R1-208ENST00000575214 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.37
HCFC1R1-208ENST00000575214 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
HCFC1R1-208ENST00000575214 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
HCFC1R1-208ENST00000575214 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
HCFC1R1-208ENST00000575214 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
HCFC1R1-208ENST00000575214 MT1AP04731 61 aa6.29□□□□□ -1.4
HCFC1R1-208ENST00000575214 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
HCFC1R1-208ENST00000575214 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
HCFC1R1-208ENST00000575214 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
HCFC1R1-208ENST00000575214 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
HCFC1R1-208ENST00000575214 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
HCFC1R1-208ENST00000575214 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
HCFC1R1-208ENST00000575214 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
HCFC1R1-208ENST00000575214 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
HCFC1R1-208ENST00000575214 MT3P25713 68 aa5.75□□□□□ -1.49
HCFC1R1-208ENST00000575214 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
HCFC1R1-208ENST00000575214 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
HCFC1R1-208ENST00000575214 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
HCFC1R1-208ENST00000575214 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
HCFC1R1-208ENST00000575214 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
HCFC1R1-208ENST00000575214 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
HCFC1R1-208ENST00000575214 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
HCFC1R1-208ENST00000575214 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
HCFC1R1-208ENST00000575214 LUZP6Q538Z0 58 aa5.15□□□□□ -1.59
HCFC1R1-208ENST00000575214 H3BS24 57 aa4.96□□□□□ -1.62
HCFC1R1-208ENST00000575214 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
HCFC1R1-208ENST00000575214 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
HCFC1R1-208ENST00000575214 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
HCFC1R1-208ENST00000575214 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
HCFC1R1-208ENST00000575214 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
HCFC1R1-208ENST00000575214 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
HCFC1R1-208ENST00000575214 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
HCFC1R1-208ENST00000575214 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.7
HCFC1R1-208ENST00000575214 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
HCFC1R1-208ENST00000575214 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
HCFC1R1-208ENST00000575214 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
HCFC1R1-208ENST00000575214 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
HCFC1R1-208ENST00000575214 INE1O15225 51 aa3.96□□□□□ -1.78
HCFC1R1-208ENST00000575214 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
HCFC1R1-208ENST00000575214 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
HCFC1R1-208ENST00000575214 PRM1P04553 51 aa3.59□□□□□ -1.83
HCFC1R1-208ENST00000575214 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
HCFC1R1-208ENST00000575214 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
HCFC1R1-208ENST00000575214 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 123.4 ms