RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 SPRR2EP22531 72 aa3.28□□□□□ -1.88
RNF213-219ENST00000574909 SPRR2BP35325 72 aa3.28□□□□□ -1.88
RNF213-219ENST00000574909 SPRR2AP35326 72 aa3.28□□□□□ -1.88
RNF213-219ENST00000574909 INE1O15225 51 aa3.27□□□□□ -1.89
RNF213-219ENST00000574909 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
RNF213-219ENST00000574909 SPRR2FQ96RM1 72 aa3.26□□□□□ -1.89
RNF213-219ENST00000574909 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
RNF213-219ENST00000574909 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
RNF213-219ENST00000574909 SPRR2DP22532 72 aa3.18□□□□□ -1.9
RNF213-219ENST00000574909 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
RNF213-219ENST00000574909 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
RNF213-219ENST00000574909 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
RNF213-219ENST00000574909 MT1XP80297 61 aa3.05□□□□□ -1.92
RNF213-219ENST00000574909 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
RNF213-219ENST00000574909 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
RNF213-219ENST00000574909 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
RNF213-219ENST00000574909 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
RNF213-219ENST00000574909 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
RNF213-219ENST00000574909 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
RNF213-219ENST00000574909 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
RNF213-219ENST00000574909 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
RNF213-219ENST00000574909 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
RNF213-219ENST00000574909 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
RNF213-219ENST00000574909 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
RNF213-219ENST00000574909 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
RNF213-219ENST00000574909 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
RNF213-219ENST00000574909 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
RNF213-219ENST00000574909 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
RNF213-219ENST00000574909 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
RNF213-219ENST00000574909 MT4P47944 62 aa2.78□□□□□ -1.96
RNF213-219ENST00000574909 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
RNF213-219ENST00000574909 MT1EP04732 61 aa2.74□□□□□ -1.97
RNF213-219ENST00000574909 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
RNF213-219ENST00000574909 MT1GP13640 62 aa2.72□□□□□ -1.97
RNF213-219ENST00000574909 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
RNF213-219ENST00000574909 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
RNF213-219ENST00000574909 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
RNF213-219ENST00000574909 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
RNF213-219ENST00000574909 MT1MQ8N339 61 aa2.63□□□□□ -1.99
RNF213-219ENST00000574909 MT1LQ93083 61 aa2.62□□□□□ -1.99
RNF213-219ENST00000574909 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
RNF213-219ENST00000574909 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
RNF213-219ENST00000574909 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
RNF213-219ENST00000574909 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
RNF213-219ENST00000574909 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
RNF213-219ENST00000574909 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
RNF213-219ENST00000574909 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
RNF213-219ENST00000574909 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
RNF213-219ENST00000574909 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
RNF213-219ENST00000574909 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
RNF213-219ENST00000574909 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
RNF213-219ENST00000574909 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
RNF213-219ENST00000574909 MT1AP04731 61 aa2.4□□□□□ -2.03
RNF213-219ENST00000574909 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
RNF213-219ENST00000574909 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
RNF213-219ENST00000574909 KRTAP9-4Q9BYQ2 154 aa2.31□□□□□ -2.04
RNF213-219ENST00000574909 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
RNF213-219ENST00000574909 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
RNF213-219ENST00000574909 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
RNF213-219ENST00000574909 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
RNF213-219ENST00000574909 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
RNF213-219ENST00000574909 PRM1P04553 51 aa2.14□□□□□ -2.07
RNF213-219ENST00000574909 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
RNF213-219ENST00000574909 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
RNF213-219ENST00000574909 MT3P25713 68 aa2.05□□□□□ -2.08
RNF213-219ENST00000574909 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
RNF213-219ENST00000574909 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
RNF213-219ENST00000574909 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
RNF213-219ENST00000574909 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
RNF213-219ENST00000574909 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
RNF213-219ENST00000574909 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
RNF213-219ENST00000574909 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
RNF213-219ENST00000574909 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
RNF213-219ENST00000574909 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
RNF213-219ENST00000574909 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
RNF213-219ENST00000574909 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
RNF213-219ENST00000574909 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
RNF213-219ENST00000574909 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms