RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 TMEM258P61165 79 aa3.99□□□□□ -1.77
NCBP3-203ENST00000574379 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
NCBP3-203ENST00000574379 MT4P47944 62 aa3.98□□□□□ -1.77
NCBP3-203ENST00000574379 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
NCBP3-203ENST00000574379 A0A0D9SG42 100 aa3.97□□□□□ -1.77
NCBP3-203ENST00000574379 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
NCBP3-203ENST00000574379 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
NCBP3-203ENST00000574379 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
NCBP3-203ENST00000574379 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
NCBP3-203ENST00000574379 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
NCBP3-203ENST00000574379 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
NCBP3-203ENST00000574379 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
NCBP3-203ENST00000574379 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
NCBP3-203ENST00000574379 A8MU10 97 aa3.88□□□□□ -1.79
NCBP3-203ENST00000574379 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
NCBP3-203ENST00000574379 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
NCBP3-203ENST00000574379 UQCR11O14957 56 aa3.77□□□□□ -1.81
NCBP3-203ENST00000574379 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
NCBP3-203ENST00000574379 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
NCBP3-203ENST00000574379 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
NCBP3-203ENST00000574379 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
NCBP3-203ENST00000574379 Q1T7F1 81 aa3.73□□□□□ -1.81
NCBP3-203ENST00000574379 V9GYY9 64 aa3.73□□□□□ -1.81
NCBP3-203ENST00000574379 PSPHP1O15172 72 aa3.7□□□□□ -1.82
NCBP3-203ENST00000574379 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
NCBP3-203ENST00000574379 MT1EP04732 61 aa3.69□□□□□ -1.82
NCBP3-203ENST00000574379 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
NCBP3-203ENST00000574379 TNP1P09430 55 aa3.68□□□□□ -1.82
NCBP3-203ENST00000574379 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
NCBP3-203ENST00000574379 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
NCBP3-203ENST00000574379 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
NCBP3-203ENST00000574379 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
NCBP3-203ENST00000574379 K7ERS5 55 aa3.59□□□□□ -1.83
NCBP3-203ENST00000574379 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
NCBP3-203ENST00000574379 A6NED7 52 aa3.58□□□□□ -1.84
NCBP3-203ENST00000574379 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
NCBP3-203ENST00000574379 MT1GP13640 62 aa3.55□□□□□ -1.84
NCBP3-203ENST00000574379 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
NCBP3-203ENST00000574379 MT1LQ93083 61 aa3.54□□□□□ -1.84
NCBP3-203ENST00000574379 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
NCBP3-203ENST00000574379 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
NCBP3-203ENST00000574379 MT1MQ8N339 61 aa3.51□□□□□ -1.85
NCBP3-203ENST00000574379 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
NCBP3-203ENST00000574379 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
NCBP3-203ENST00000574379 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
NCBP3-203ENST00000574379 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
NCBP3-203ENST00000574379 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
NCBP3-203ENST00000574379 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
NCBP3-203ENST00000574379 ROMO1P60602 79 aa3.39□□□□□ -1.87
NCBP3-203ENST00000574379 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
NCBP3-203ENST00000574379 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
NCBP3-203ENST00000574379 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
NCBP3-203ENST00000574379 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
NCBP3-203ENST00000574379 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
NCBP3-203ENST00000574379 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
NCBP3-203ENST00000574379 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
NCBP3-203ENST00000574379 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
NCBP3-203ENST00000574379 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
NCBP3-203ENST00000574379 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
NCBP3-203ENST00000574379 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
NCBP3-203ENST00000574379 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
NCBP3-203ENST00000574379 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
NCBP3-203ENST00000574379 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
NCBP3-203ENST00000574379 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
NCBP3-203ENST00000574379 MT1AP04731 61 aa3.03□□□□□ -1.92
NCBP3-203ENST00000574379 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
NCBP3-203ENST00000574379 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
NCBP3-203ENST00000574379 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
NCBP3-203ENST00000574379 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
NCBP3-203ENST00000574379 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
NCBP3-203ENST00000574379 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
NCBP3-203ENST00000574379 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
NCBP3-203ENST00000574379 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
NCBP3-203ENST00000574379 INE1O15225 51 aa1.98□□□□□ -2.09
NCBP3-203ENST00000574379 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NCBP3-203ENST00000574379 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
NCBP3-203ENST00000574379 PRM1P04553 51 aa1.75□□□□□ -2.13
NCBP3-203ENST00000574379 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 545 ms