RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 TNP1P09430 55 aa3.86□□□□□ -1.79
NPLOC4-216ENST00000574344 SPRR2DP22532 72 aa3.85□□□□□ -1.79
NPLOC4-216ENST00000574344 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
NPLOC4-216ENST00000574344 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
NPLOC4-216ENST00000574344 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
NPLOC4-216ENST00000574344 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
NPLOC4-216ENST00000574344 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
NPLOC4-216ENST00000574344 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
NPLOC4-216ENST00000574344 MT1EP04732 61 aa3.59□□□□□ -1.83
NPLOC4-216ENST00000574344 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
NPLOC4-216ENST00000574344 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
NPLOC4-216ENST00000574344 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
NPLOC4-216ENST00000574344 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
NPLOC4-216ENST00000574344 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
NPLOC4-216ENST00000574344 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
NPLOC4-216ENST00000574344 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
NPLOC4-216ENST00000574344 MT1GP13640 62 aa3.48□□□□□ -1.85
NPLOC4-216ENST00000574344 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
NPLOC4-216ENST00000574344 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
NPLOC4-216ENST00000574344 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
NPLOC4-216ENST00000574344 MT1MQ8N339 61 aa3.43□□□□□ -1.86
NPLOC4-216ENST00000574344 MT1LQ93083 61 aa3.43□□□□□ -1.86
NPLOC4-216ENST00000574344 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
NPLOC4-216ENST00000574344 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
NPLOC4-216ENST00000574344 MT4P47944 62 aa3.38□□□□□ -1.87
NPLOC4-216ENST00000574344 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
NPLOC4-216ENST00000574344 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
NPLOC4-216ENST00000574344 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
NPLOC4-216ENST00000574344 H3BS24 57 aa3.3□□□□□ -1.88
NPLOC4-216ENST00000574344 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NPLOC4-216ENST00000574344 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
NPLOC4-216ENST00000574344 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
NPLOC4-216ENST00000574344 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
NPLOC4-216ENST00000574344 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
NPLOC4-216ENST00000574344 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
NPLOC4-216ENST00000574344 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
NPLOC4-216ENST00000574344 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
NPLOC4-216ENST00000574344 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
NPLOC4-216ENST00000574344 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
NPLOC4-216ENST00000574344 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
NPLOC4-216ENST00000574344 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
NPLOC4-216ENST00000574344 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
NPLOC4-216ENST00000574344 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
NPLOC4-216ENST00000574344 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
NPLOC4-216ENST00000574344 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
NPLOC4-216ENST00000574344 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
NPLOC4-216ENST00000574344 MT1AP04731 61 aa2.92□□□□□ -1.94
NPLOC4-216ENST00000574344 INE1O15225 51 aa2.9□□□□□ -1.95
NPLOC4-216ENST00000574344 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
NPLOC4-216ENST00000574344 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
NPLOC4-216ENST00000574344 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
NPLOC4-216ENST00000574344 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
NPLOC4-216ENST00000574344 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
NPLOC4-216ENST00000574344 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NPLOC4-216ENST00000574344 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
NPLOC4-216ENST00000574344 MT3P25713 68 aa2.68□□□□□ -1.98
NPLOC4-216ENST00000574344 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
NPLOC4-216ENST00000574344 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
NPLOC4-216ENST00000574344 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
NPLOC4-216ENST00000574344 MUC5ACP98088 5654 aa2.58□□□□□ -2
NPLOC4-216ENST00000574344 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
NPLOC4-216ENST00000574344 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
NPLOC4-216ENST00000574344 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
NPLOC4-216ENST00000574344 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
NPLOC4-216ENST00000574344 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
NPLOC4-216ENST00000574344 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NPLOC4-216ENST00000574344 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
NPLOC4-216ENST00000574344 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
NPLOC4-216ENST00000574344 PRM1P04553 51 aa2.17□□□□□ -2.06
NPLOC4-216ENST00000574344 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
NPLOC4-216ENST00000574344 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
NPLOC4-216ENST00000574344 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
NPLOC4-216ENST00000574344 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
NPLOC4-216ENST00000574344 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
NPLOC4-216ENST00000574344 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
NPLOC4-216ENST00000574344 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
NPLOC4-216ENST00000574344 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
NPLOC4-216ENST00000574344 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms