RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 MT1EP04732 61 aa4.27□□□□□ -1.73
ATP2A3-213ENST00000574202 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
ATP2A3-213ENST00000574202 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
ATP2A3-213ENST00000574202 SPRR2EP22531 72 aa4.16□□□□□ -1.74
ATP2A3-213ENST00000574202 SPRR2BP35325 72 aa4.16□□□□□ -1.74
ATP2A3-213ENST00000574202 SPRR2AP35326 72 aa4.16□□□□□ -1.74
ATP2A3-213ENST00000574202 MT1LQ93083 61 aa4.16□□□□□ -1.74
ATP2A3-213ENST00000574202 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
ATP2A3-213ENST00000574202 MT1GP13640 62 aa4.1□□□□□ -1.75
ATP2A3-213ENST00000574202 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
ATP2A3-213ENST00000574202 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
ATP2A3-213ENST00000574202 MT1MQ8N339 61 aa4.05□□□□□ -1.76
ATP2A3-213ENST00000574202 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
ATP2A3-213ENST00000574202 SPRR2DP22532 72 aa4.01□□□□□ -1.77
ATP2A3-213ENST00000574202 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
ATP2A3-213ENST00000574202 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
ATP2A3-213ENST00000574202 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
ATP2A3-213ENST00000574202 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
ATP2A3-213ENST00000574202 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
ATP2A3-213ENST00000574202 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
ATP2A3-213ENST00000574202 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
ATP2A3-213ENST00000574202 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
ATP2A3-213ENST00000574202 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
ATP2A3-213ENST00000574202 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
ATP2A3-213ENST00000574202 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
ATP2A3-213ENST00000574202 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
ATP2A3-213ENST00000574202 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
ATP2A3-213ENST00000574202 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
ATP2A3-213ENST00000574202 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
ATP2A3-213ENST00000574202 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
ATP2A3-213ENST00000574202 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
ATP2A3-213ENST00000574202 MT1AP04731 61 aa3.56□□□□□ -1.84
ATP2A3-213ENST00000574202 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
ATP2A3-213ENST00000574202 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
ATP2A3-213ENST00000574202 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
ATP2A3-213ENST00000574202 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
ATP2A3-213ENST00000574202 MT4P47944 62 aa3.48□□□□□ -1.85
ATP2A3-213ENST00000574202 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ATP2A3-213ENST00000574202 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
ATP2A3-213ENST00000574202 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
ATP2A3-213ENST00000574202 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
ATP2A3-213ENST00000574202 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
ATP2A3-213ENST00000574202 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
ATP2A3-213ENST00000574202 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
ATP2A3-213ENST00000574202 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
ATP2A3-213ENST00000574202 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
ATP2A3-213ENST00000574202 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
ATP2A3-213ENST00000574202 MT3P25713 68 aa3.24□□□□□ -1.89
ATP2A3-213ENST00000574202 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
ATP2A3-213ENST00000574202 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
ATP2A3-213ENST00000574202 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
ATP2A3-213ENST00000574202 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
ATP2A3-213ENST00000574202 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
ATP2A3-213ENST00000574202 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
ATP2A3-213ENST00000574202 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
ATP2A3-213ENST00000574202 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
ATP2A3-213ENST00000574202 INE1O15225 51 aa2.87□□□□□ -1.95
ATP2A3-213ENST00000574202 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
ATP2A3-213ENST00000574202 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
ATP2A3-213ENST00000574202 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
ATP2A3-213ENST00000574202 H3BS24 57 aa2.75□□□□□ -1.97
ATP2A3-213ENST00000574202 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
ATP2A3-213ENST00000574202 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
ATP2A3-213ENST00000574202 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
ATP2A3-213ENST00000574202 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
ATP2A3-213ENST00000574202 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
ATP2A3-213ENST00000574202 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
ATP2A3-213ENST00000574202 PRM1P04553 51 aa2.47□□□□□ -2.01
ATP2A3-213ENST00000574202 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
ATP2A3-213ENST00000574202 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
ATP2A3-213ENST00000574202 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
ATP2A3-213ENST00000574202 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
ATP2A3-213ENST00000574202 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
ATP2A3-213ENST00000574202 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
ATP2A3-213ENST00000574202 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
ATP2A3-213ENST00000574202 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
ATP2A3-213ENST00000574202 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
ATP2A3-213ENST00000574202 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 25.4 ms