RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 UQCR11O14957 56 aa7.54□□□□□ -1.2
HCFC1R1-205ENST00000573842 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
HCFC1R1-205ENST00000573842 KRTAP4-9Q9BYQ8 210 aa7.52□□□□□ -1.21
HCFC1R1-205ENST00000573842 V9GYY9 64 aa7.49□□□□□ -1.21
HCFC1R1-205ENST00000573842 GPR98Q8WXG9 6306 aa7.4□□□□□ -1.22
HCFC1R1-205ENST00000573842 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
HCFC1R1-205ENST00000573842 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
HCFC1R1-205ENST00000573842 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
HCFC1R1-205ENST00000573842 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
HCFC1R1-205ENST00000573842 Q1T7F1 81 aa7.36□□□□□ -1.23
HCFC1R1-205ENST00000573842 KRTAP4-3Q9BYR4 195 aa7.36□□□□□ -1.23
HCFC1R1-205ENST00000573842 PSPHP1O15172 72 aa7.33□□□□□ -1.24
HCFC1R1-205ENST00000573842 MT4P47944 62 aa7.3□□□□□ -1.24
HCFC1R1-205ENST00000573842 K7ERS5 55 aa7.29□□□□□ -1.24
HCFC1R1-205ENST00000573842 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
HCFC1R1-205ENST00000573842 HMCN1Q96RW7 5635 aa7.26□□□□□ -1.25
HCFC1R1-205ENST00000573842 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
HCFC1R1-205ENST00000573842 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
HCFC1R1-205ENST00000573842 A6NED7 52 aa7.15□□□□□ -1.26
HCFC1R1-205ENST00000573842 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
HCFC1R1-205ENST00000573842 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
HCFC1R1-205ENST00000573842 AHNAK2Q8IVF2 5795 aa7□□□□□ -1.29
HCFC1R1-205ENST00000573842 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
HCFC1R1-205ENST00000573842 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
HCFC1R1-205ENST00000573842 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
HCFC1R1-205ENST00000573842 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
HCFC1R1-205ENST00000573842 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
HCFC1R1-205ENST00000573842 KRTAP5-10Q6L8G5 202 aa6.84□□□□□ -1.31
HCFC1R1-205ENST00000573842 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
HCFC1R1-205ENST00000573842 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
HCFC1R1-205ENST00000573842 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
HCFC1R1-205ENST00000573842 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
HCFC1R1-205ENST00000573842 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
HCFC1R1-205ENST00000573842 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
HCFC1R1-205ENST00000573842 ROMO1P60602 79 aa6.73□□□□□ -1.33
HCFC1R1-205ENST00000573842 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
HCFC1R1-205ENST00000573842 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.34
HCFC1R1-205ENST00000573842 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
HCFC1R1-205ENST00000573842 KRTAP5-7Q6L8G8 165 aa6.59□□□□□ -1.35
HCFC1R1-205ENST00000573842 MT1AP04731 61 aa6.47□□□□□ -1.37
HCFC1R1-205ENST00000573842 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
HCFC1R1-205ENST00000573842 KRTAP6-1Q3LI64 71 aa6.41□□□□□ -1.38
HCFC1R1-205ENST00000573842 KRTAP9-6A8MVA2 160 aa6.34□□□□□ -1.39
HCFC1R1-205ENST00000573842 KRTAP5-2Q701N4 177 aa6.32□□□□□ -1.4
HCFC1R1-205ENST00000573842 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
HCFC1R1-205ENST00000573842 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
HCFC1R1-205ENST00000573842 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
HCFC1R1-205ENST00000573842 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
HCFC1R1-205ENST00000573842 OBSCNQ5VST9 7968 aa5.93□□□□□ -1.46
HCFC1R1-205ENST00000573842 MT3P25713 68 aa5.92□□□□□ -1.46
HCFC1R1-205ENST00000573842 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
HCFC1R1-205ENST00000573842 MUC5BQ9HC84 5762 aaPredicted RBP5.75□□□□□ -1.49
HCFC1R1-205ENST00000573842 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
HCFC1R1-205ENST00000573842 AHNAKQ09666 5890 aaKnown RBP5.73□□□□□ -1.49
HCFC1R1-205ENST00000573842 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
HCFC1R1-205ENST00000573842 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
HCFC1R1-205ENST00000573842 H3BS24 57 aa5.58□□□□□ -1.52
HCFC1R1-205ENST00000573842 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
HCFC1R1-205ENST00000573842 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
HCFC1R1-205ENST00000573842 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
HCFC1R1-205ENST00000573842 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
HCFC1R1-205ENST00000573842 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
HCFC1R1-205ENST00000573842 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
HCFC1R1-205ENST00000573842 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
HCFC1R1-205ENST00000573842 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
HCFC1R1-205ENST00000573842 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
HCFC1R1-205ENST00000573842 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
HCFC1R1-205ENST00000573842 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
HCFC1R1-205ENST00000573842 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
HCFC1R1-205ENST00000573842 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
HCFC1R1-205ENST00000573842 INE1O15225 51 aa4.38□□□□□ -1.71
HCFC1R1-205ENST00000573842 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
HCFC1R1-205ENST00000573842 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
HCFC1R1-205ENST00000573842 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
HCFC1R1-205ENST00000573842 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
HCFC1R1-205ENST00000573842 PRM1P04553 51 aa3.44□□□□□ -1.86
HCFC1R1-205ENST00000573842 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
HCFC1R1-205ENST00000573842 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms