RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
NPLOC4-212ENST00000573328 PRR15LQ9BU68 103 aa3.47□□□□□ -1.85
NPLOC4-212ENST00000573328 TNP1P09430 55 aa3.46□□□□□ -1.86
NPLOC4-212ENST00000573328 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
NPLOC4-212ENST00000573328 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
NPLOC4-212ENST00000573328 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
NPLOC4-212ENST00000573328 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
NPLOC4-212ENST00000573328 MT1MQ8N339 61 aa3.43□□□□□ -1.86
NPLOC4-212ENST00000573328 MT1LQ93083 61 aa3.43□□□□□ -1.86
NPLOC4-212ENST00000573328 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
NPLOC4-212ENST00000573328 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
NPLOC4-212ENST00000573328 MT4P47944 62 aa3.38□□□□□ -1.87
NPLOC4-212ENST00000573328 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
NPLOC4-212ENST00000573328 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
NPLOC4-212ENST00000573328 TMEM258P61165 79 aa3.34□□□□□ -1.87
NPLOC4-212ENST00000573328 UQCR11O14957 56 aa3.33□□□□□ -1.88
NPLOC4-212ENST00000573328 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
NPLOC4-212ENST00000573328 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
NPLOC4-212ENST00000573328 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
NPLOC4-212ENST00000573328 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
NPLOC4-212ENST00000573328 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
NPLOC4-212ENST00000573328 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
NPLOC4-212ENST00000573328 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
NPLOC4-212ENST00000573328 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
NPLOC4-212ENST00000573328 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
NPLOC4-212ENST00000573328 K7ERS5 55 aa3.24□□□□□ -1.89
NPLOC4-212ENST00000573328 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
NPLOC4-212ENST00000573328 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.89
NPLOC4-212ENST00000573328 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
NPLOC4-212ENST00000573328 V9GYY9 64 aa3.18□□□□□ -1.9
NPLOC4-212ENST00000573328 PSPHP1O15172 72 aa3.16□□□□□ -1.9
NPLOC4-212ENST00000573328 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
NPLOC4-212ENST00000573328 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
NPLOC4-212ENST00000573328 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
NPLOC4-212ENST00000573328 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
NPLOC4-212ENST00000573328 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
NPLOC4-212ENST00000573328 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
NPLOC4-212ENST00000573328 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
NPLOC4-212ENST00000573328 Q1T7F1 81 aa3.09□□□□□ -1.91
NPLOC4-212ENST00000573328 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
NPLOC4-212ENST00000573328 A6NED7 52 aa3.07□□□□□ -1.92
NPLOC4-212ENST00000573328 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
NPLOC4-212ENST00000573328 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
NPLOC4-212ENST00000573328 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
NPLOC4-212ENST00000573328 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
NPLOC4-212ENST00000573328 ROMO1P60602 79 aa2.96□□□□□ -1.94
NPLOC4-212ENST00000573328 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
NPLOC4-212ENST00000573328 MT1AP04731 61 aa2.92□□□□□ -1.94
NPLOC4-212ENST00000573328 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
NPLOC4-212ENST00000573328 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
NPLOC4-212ENST00000573328 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
NPLOC4-212ENST00000573328 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
NPLOC4-212ENST00000573328 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
NPLOC4-212ENST00000573328 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
NPLOC4-212ENST00000573328 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NPLOC4-212ENST00000573328 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
NPLOC4-212ENST00000573328 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
NPLOC4-212ENST00000573328 MT3P25713 68 aa2.68□□□□□ -1.98
NPLOC4-212ENST00000573328 PRAC1Q96KF2 57 aa2.61□□□□□ -1.99
NPLOC4-212ENST00000573328 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
NPLOC4-212ENST00000573328 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
NPLOC4-212ENST00000573328 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
NPLOC4-212ENST00000573328 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
NPLOC4-212ENST00000573328 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NPLOC4-212ENST00000573328 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
NPLOC4-212ENST00000573328 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
NPLOC4-212ENST00000573328 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
NPLOC4-212ENST00000573328 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
NPLOC4-212ENST00000573328 INE1O15225 51 aa2.07□□□□□ -2.08
NPLOC4-212ENST00000573328 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
NPLOC4-212ENST00000573328 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
NPLOC4-212ENST00000573328 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
NPLOC4-212ENST00000573328 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
NPLOC4-212ENST00000573328 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
NPLOC4-212ENST00000573328 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
NPLOC4-212ENST00000573328 PRM1P04553 51 aa1.52□□□□□ -2.17
NPLOC4-212ENST00000573328 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NPLOC4-212ENST00000573328 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 8.5 ms