RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 Q1T7F1 81 aa6.8□□□□□ -1.32
HCFC1R1-204ENST00000573095 SMIM26A0A096LP01 95 aa6.79□□□□□ -1.32
HCFC1R1-204ENST00000573095 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
HCFC1R1-204ENST00000573095 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
HCFC1R1-204ENST00000573095 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
HCFC1R1-204ENST00000573095 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
HCFC1R1-204ENST00000573095 KRTAP5-4Q6L8H1 288 aa6.73□□□□□ -1.33
HCFC1R1-204ENST00000573095 V9GYY9 64 aa6.72□□□□□ -1.33
HCFC1R1-204ENST00000573095 TNP1P09430 55 aa6.71□□□□□ -1.34
HCFC1R1-204ENST00000573095 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
HCFC1R1-204ENST00000573095 PSPHP1O15172 72 aa6.69□□□□□ -1.34
HCFC1R1-204ENST00000573095 UQCR11O14957 56 aa6.68□□□□□ -1.34
HCFC1R1-204ENST00000573095 AHNAK2Q8IVF2 5795 aa6.6□□□□□ -1.35
HCFC1R1-204ENST00000573095 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
HCFC1R1-204ENST00000573095 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
HCFC1R1-204ENST00000573095 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
HCFC1R1-204ENST00000573095 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
HCFC1R1-204ENST00000573095 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
HCFC1R1-204ENST00000573095 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
HCFC1R1-204ENST00000573095 A6NED7 52 aa6.44□□□□□ -1.38
HCFC1R1-204ENST00000573095 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
HCFC1R1-204ENST00000573095 KRTAP5-3Q6L8H2 238 aa6.37□□□□□ -1.39
HCFC1R1-204ENST00000573095 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
HCFC1R1-204ENST00000573095 KRTAP5-7Q6L8G8 165 aa6.35□□□□□ -1.39
HCFC1R1-204ENST00000573095 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
HCFC1R1-204ENST00000573095 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
HCFC1R1-204ENST00000573095 K7ERS5 55 aa6.25□□□□□ -1.41
HCFC1R1-204ENST00000573095 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
HCFC1R1-204ENST00000573095 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
HCFC1R1-204ENST00000573095 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
HCFC1R1-204ENST00000573095 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
HCFC1R1-204ENST00000573095 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
HCFC1R1-204ENST00000573095 ROMO1P60602 79 aa6.03□□□□□ -1.44
HCFC1R1-204ENST00000573095 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
HCFC1R1-204ENST00000573095 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
HCFC1R1-204ENST00000573095 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
HCFC1R1-204ENST00000573095 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
HCFC1R1-204ENST00000573095 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
HCFC1R1-204ENST00000573095 MT1AP04731 61 aa5.85□□□□□ -1.47
HCFC1R1-204ENST00000573095 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
HCFC1R1-204ENST00000573095 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
HCFC1R1-204ENST00000573095 KRTAP5-8O75690 187 aa5.66□□□□□ -1.5
HCFC1R1-204ENST00000573095 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
HCFC1R1-204ENST00000573095 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
HCFC1R1-204ENST00000573095 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
HCFC1R1-204ENST00000573095 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
HCFC1R1-204ENST00000573095 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
HCFC1R1-204ENST00000573095 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
HCFC1R1-204ENST00000573095 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
HCFC1R1-204ENST00000573095 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
HCFC1R1-204ENST00000573095 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
HCFC1R1-204ENST00000573095 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
HCFC1R1-204ENST00000573095 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
HCFC1R1-204ENST00000573095 MT3P25713 68 aa5.35□□□□□ -1.55
HCFC1R1-204ENST00000573095 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
HCFC1R1-204ENST00000573095 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
HCFC1R1-204ENST00000573095 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
HCFC1R1-204ENST00000573095 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
HCFC1R1-204ENST00000573095 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
HCFC1R1-204ENST00000573095 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
HCFC1R1-204ENST00000573095 H3BS24 57 aa4.52□□□□□ -1.69
HCFC1R1-204ENST00000573095 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
HCFC1R1-204ENST00000573095 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
HCFC1R1-204ENST00000573095 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
HCFC1R1-204ENST00000573095 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
HCFC1R1-204ENST00000573095 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
HCFC1R1-204ENST00000573095 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
HCFC1R1-204ENST00000573095 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
HCFC1R1-204ENST00000573095 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HCFC1R1-204ENST00000573095 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
HCFC1R1-204ENST00000573095 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
HCFC1R1-204ENST00000573095 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
HCFC1R1-204ENST00000573095 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
HCFC1R1-204ENST00000573095 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
HCFC1R1-204ENST00000573095 INE1O15225 51 aa3.18□□□□□ -1.9
HCFC1R1-204ENST00000573095 PRM1P04553 51 aa3.13□□□□□ -1.91
HCFC1R1-204ENST00000573095 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
HCFC1R1-204ENST00000573095 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 108.6 ms