RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
LITAF-208ENST00000571627 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
LITAF-208ENST00000571627 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
LITAF-208ENST00000571627 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
LITAF-208ENST00000571627 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
LITAF-208ENST00000571627 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
LITAF-208ENST00000571627 MT1GP13640 62 aa5.21□□□□□ -1.58
LITAF-208ENST00000571627 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
LITAF-208ENST00000571627 MT1LQ93083 61 aa5.19□□□□□ -1.58
LITAF-208ENST00000571627 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
LITAF-208ENST00000571627 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
LITAF-208ENST00000571627 MT1MQ8N339 61 aa5.16□□□□□ -1.58
LITAF-208ENST00000571627 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
LITAF-208ENST00000571627 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
LITAF-208ENST00000571627 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
LITAF-208ENST00000571627 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
LITAF-208ENST00000571627 ROMO1P60602 79 aa5.04□□□□□ -1.6
LITAF-208ENST00000571627 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
LITAF-208ENST00000571627 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
LITAF-208ENST00000571627 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
LITAF-208ENST00000571627 MT4P47944 62 aa4.93□□□□□ -1.62
LITAF-208ENST00000571627 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
LITAF-208ENST00000571627 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
LITAF-208ENST00000571627 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
LITAF-208ENST00000571627 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
LITAF-208ENST00000571627 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
LITAF-208ENST00000571627 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
LITAF-208ENST00000571627 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
LITAF-208ENST00000571627 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
LITAF-208ENST00000571627 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
LITAF-208ENST00000571627 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
LITAF-208ENST00000571627 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
LITAF-208ENST00000571627 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
LITAF-208ENST00000571627 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
LITAF-208ENST00000571627 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
LITAF-208ENST00000571627 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
LITAF-208ENST00000571627 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
LITAF-208ENST00000571627 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
LITAF-208ENST00000571627 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
LITAF-208ENST00000571627 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
LITAF-208ENST00000571627 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
LITAF-208ENST00000571627 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
LITAF-208ENST00000571627 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
LITAF-208ENST00000571627 MT1AP04731 61 aa4.4□□□□□ -1.71
LITAF-208ENST00000571627 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
LITAF-208ENST00000571627 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
LITAF-208ENST00000571627 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
LITAF-208ENST00000571627 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
LITAF-208ENST00000571627 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
LITAF-208ENST00000571627 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
LITAF-208ENST00000571627 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
LITAF-208ENST00000571627 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
LITAF-208ENST00000571627 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
LITAF-208ENST00000571627 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
LITAF-208ENST00000571627 MT3P25713 68 aa4.03□□□□□ -1.76
LITAF-208ENST00000571627 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
LITAF-208ENST00000571627 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
LITAF-208ENST00000571627 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
LITAF-208ENST00000571627 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
LITAF-208ENST00000571627 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
LITAF-208ENST00000571627 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
LITAF-208ENST00000571627 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
LITAF-208ENST00000571627 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
LITAF-208ENST00000571627 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
LITAF-208ENST00000571627 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
LITAF-208ENST00000571627 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
LITAF-208ENST00000571627 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
LITAF-208ENST00000571627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
LITAF-208ENST00000571627 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
LITAF-208ENST00000571627 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
LITAF-208ENST00000571627 INE1O15225 51 aa2.96□□□□□ -1.94
LITAF-208ENST00000571627 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
LITAF-208ENST00000571627 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
LITAF-208ENST00000571627 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
LITAF-208ENST00000571627 PRM1P04553 51 aa2.56□□□□□ -2
LITAF-208ENST00000571627 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LITAF-208ENST00000571627 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
LITAF-208ENST00000571627 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 88.6 ms